Lariat RNA debranching prevents harmful siRNA burst in plants

Lariat RNAs are formed from introns during pre-messenger RNA splicing, after which they are degraded by the debranching enzyme DBR1. Impairment of DBR1 leads to developmental arrest, yet the mechanism remains unclear. In this study, we found that debranching of lariat RNA prevents production of 21- and 22-nucleotide lariat-derived small interfering RNAs (lasiRNAs), which causes a burst of exonic siRNAs, thereby safeguarding development and defense response. LasiRNA biogenesis relied on RNA-dependent RNA polymerases and Dicer-like proteins (DCLs). Upon pathogen infection and dysfunction of DBR1, many lariat RNAs were hijacked by DCL4 and DCL2 and processed into siRNAs that particularly target immunity genes, ultimately disrupting plant defense responses. Collectively, DBR1-mediated lariat RNA removal serves as a protective mechanism to prevent the activation of a small RNA-based defense system in plants.

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Publication Details

Journal
Science
Published
2026-06-25
DOI
https://doi.org/10.1126/science.aeb4938
Primary Topic
Plant Molecular Biology Research
Type
article
Field-Weighted Citation Impact
0.00

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article

Lariat RNA debranching prevents harmful siRNA burst in plants

Mengjie Zhu, Binglian Zheng, Jinbiao Ma, Chengying Ding et al.
Science
Plant Molecular Biology Research
article

Lariat RNA debranching prevents harmful siRNA burst in plants

Mengjie Zhu, Binglian Zheng, Jinbiao Ma, Chengying Ding, Xiaotuo Zhang, Ruixue Cui, Taiyun Wang, Guodong Ren, Xiaoming Zhang, Qi Tang, Wenya Yang
article en

Abstract

Lariat RNAs are formed from introns during pre-messenger RNA splicing, after which they are degraded by the debranching enzyme DBR1. Impairment of DBR1 leads to developmental arrest, yet the mechanism remains unclear. In this study, we found that debranching of lariat RNA prevents production of 21- and 22-nucleotide lariat-derived small interfering RNAs (lasiRNAs), which causes a burst of exonic siRNAs, thereby safeguarding development and defense response. LasiRNA biogenesis relied on RNA-dependent RNA polymerases and Dicer-like proteins (DCLs). Upon pathogen infection and dysfunction of DBR1, many lariat RNAs were hijacked by DCL4 and DCL2 and processed into siRNAs that particularly target immunity genes, ultimately disrupting plant defense responses. Collectively, DBR1-mediated lariat RNA removal serves as a protective mechanism to prevent the activation of a small RNA-based defense system in plants.

ScienceVol. 392(6805)
Fudan University (CN), State Key Laboratory of Plant Genomics (CN), Institute of Genetics and Developmental Biology (CN), University of Chinese Academy of Sciences (CN), Institute of Zoology (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 9%
Plant Molecular Biology Research
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