Design, synthesis, biological evaluation, and in silico characterization of chalcone derivatives as antidiabetic hits

A series of 40 chalcone derivatives was synthesized through Claisen–Schmidt condensation and characterized by FT-IR and NMR spectroscopy. The compounds were evaluated for α-amylase inhibitory and DPPH radical-scavenging activities to identify chalcone-based hits with a dual in vitro profile relevant to postprandial glycemic control. The series displayed a broad range of activities, with α-amylase IC 50 , values spanning 10.41 ± 1.23–1021.64 ± 2.75 µM and radical-scavenging IC 50 , values ranging from 31.34 ± 0.20 to 698.34 ± 14.56 µM. Among the evaluated compounds, 4 , 17 , 19 , 31 , 33 , and 35 emerged as the most active α-amylase inhibitors, with compound 4 being the most potent member of the series (IC 50 = 10.41 ± 1.23 µM), outperforming acarbose (IC 50 = 73.12 ± 5.04 µM). Structure–activity relationship analysis indicated that hydroxy- and methoxy-substituted aryl motifs were generally favorable, whereas some heteroaryl replacements and heavily halogenated patterns were less well tolerated. To rationalize the experimental profile, an ensemble docking workflow coupled to Naive Bayes rescoring was applied to human pancreatic α-amylase. The predicted binding modes supported productive occupation of the catalytic groove and suggested a key interaction between compound 4 and Glu233, consistent with its superior inhibitory potency. In silico ADMET profiling of the leading compounds indicated acceptable lipophilicity, solubility, intestinal absorption, and low predicted cardiotoxicity, with compound 4 showing the most balanced overall profile. In summary, these findings identify this chalcone series as a promising starting point for hit-to-lead optimization toward multifunctional radical scavenging and α-amylase inhibitors.

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Journal
Scientific Reports
Published
2026-06-24
DOI
https://doi.org/10.1038/s41598-026-55706-3
Primary Topic
Natural Antidiabetic Agents Studies
Type
article
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article

Design, synthesis, biological evaluation, and in silico characterization of chalcone derivatives as antidiabetic hits

Amir Zada, Jamal Rafique, Muhammad Ishaq Ali Shah, Gabriela Ramos Borges et al.
Scientific Reports
Natural Antidiabetic Agents Studies
article

Design, synthesis, biological evaluation, and in silico characterization of chalcone derivatives as antidiabetic hits

Amir Zada, Jamal Rafique, Muhammad Ishaq Ali Shah, Gabriela Ramos Borges, Bruno J. Neves, Tiago Elias Allievi Frizon, Zubair Hussain, A Ali, Fethi Ahmet Özdemir, Frederico de Bastos Oliveira Dias, Luiz Henrique Keng Queiroz Júnior, Mohammad Naeem, Ahmet Çetin, Gustavo S. S. Felizardo, Sumbal Saba
article en

Abstract

A series of 40 chalcone derivatives was synthesized through Claisen–Schmidt condensation and characterized by FT-IR and NMR spectroscopy. The compounds were evaluated for α-amylase inhibitory and DPPH radical-scavenging activities to identify chalcone-based hits with a dual in vitro profile relevant to postprandial glycemic control. The series displayed a broad range of activities, with α-amylase IC 50 , values spanning 10.41 ± 1.23–1021.64 ± 2.75 µM and radical-scavenging IC 50 , values ranging from 31.34 ± 0.20 to 698.34 ± 14.56 µM. Among the evaluated compounds, 4 , 17 , 19 , 31 , 33 , and 35 emerged as the most active α-amylase inhibitors, with compound 4 being the most potent member of the series (IC 50 = 10.41 ± 1.23 µM), outperforming acarbose (IC 50 = 73.12 ± 5.04 µM). Structure–activity relationship analysis indicated that hydroxy- and methoxy-substituted aryl motifs were generally favorable, whereas some heteroaryl replacements and heavily halogenated patterns were less well tolerated. To rationalize the experimental profile, an ensemble docking workflow coupled to Naive Bayes rescoring was applied to human pancreatic α-amylase. The predicted binding modes supported productive occupation of the catalytic groove and suggested a key interaction between compound 4 and Glu233, consistent with its superior inhibitory potency. In silico ADMET profiling of the leading compounds indicated acceptable lipophilicity, solubility, intestinal absorption, and low predicted cardiotoxicity, with compound 4 showing the most balanced overall profile. In summary, these findings identify this chalcone series as a promising starting point for hit-to-lead optimization toward multifunctional radical scavenging and α-amylase inhibitors.

Scientific Reports
Universidade Federal de Mato Grosso do Sul (BR), National Institute for Biotechnology and Genetic Engineering (PK), Bingöl University (TR), Abdul Wali Khan University Mardan (PK), Universidade Federal de Santa Catarina (BR), Universidade Federal de Goiás (BR)
Openalex Percentile: Top 7%
Natural Antidiabetic Agents Studies
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