High-Throughput Phenotyping: Status and Applications in Rice Breeding

The reliance on traditional or manual phenotyping creates significant operational bottlenecks in rice breeding due to its resource-intensive and time-consuming nature. This review focused on the significance of high-throughput phenotyping (HTP) as a promising technology that enables rapid, accurate, and non-destructive phenotyping of large populations. HTP has great potential to accelerate rice breeding by revolutionizing phenomics. This review examined the various applications of HTP in rice research, phenomics, and breeding. The use of HTP in rice has been substantiated through a range of cutting-edge technologies, such as drones, imaging systems, and sensor networks, that facilitate precise monitoring of key traits at various growth stages, assessment of responses to biotic and abiotic stresses, and the identification of genes or quantitative trait loci (QTLs) associated with essential characteristics. Also, this review discussed HTPs’ contributions to current rice breeding programs and documented notable challenges in scaling them. This review offers insights into optimizing HTP strategies to advance rice research, phenomics, and rice breeding.

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Publication Details

Journal
Plants
Published
2026-06-24
DOI
https://doi.org/10.3390/plants15131944
Primary Topic
Genetic Mapping and Diversity in Plants and Animals
Type
article
Field-Weighted Citation Impact
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article

High-Throughput Phenotyping: Status and Applications in Rice Breeding

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Plants
Genetic Mapping and Diversity in Plants and Animals
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High-Throughput Phenotyping: Status and Applications in Rice Breeding

L. V. Gramaje, Suresh B. Kadaru, Jose E. Hernandez, Nia Manlulu, Rogemae Ravela, Pompe Sta Cruz, Norvie Manigbas, Alvin Palanog, Monique Corpuz, Parthiban Thathapalli Prakash
article en

Abstract

The reliance on traditional or manual phenotyping creates significant operational bottlenecks in rice breeding due to its resource-intensive and time-consuming nature. This review focused on the significance of high-throughput phenotyping (HTP) as a promising technology that enables rapid, accurate, and non-destructive phenotyping of large populations. HTP has great potential to accelerate rice breeding by revolutionizing phenomics. This review examined the various applications of HTP in rice research, phenomics, and breeding. The use of HTP in rice has been substantiated through a range of cutting-edge technologies, such as drones, imaging systems, and sensor networks, that facilitate precise monitoring of key traits at various growth stages, assessment of responses to biotic and abiotic stresses, and the identification of genes or quantitative trait loci (QTLs) associated with essential characteristics. Also, this review discussed HTPs’ contributions to current rice breeding programs and documented notable challenges in scaling them. This review offers insights into optimizing HTP strategies to advance rice research, phenomics, and rice breeding.

PlantsVol. 15(13)
University of the Philippines Los Baños (PH), International Rice Research Institute (PH), Philippine Rice Research Institute (PH), Central Luzon State University (PH), University of Negros Occidental – Recoletos (PH), International Maize and Wheat Improvement Center (KE)
Openalex Percentile: Top 8%
Genetic Mapping and Diversity in Plants and Animals
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