A Rapamycin Pharmacogenomic Approach for the Childhood Dementia <scp>N</scp> iemann‐ <scp>P</scp> ick C

mice, Rapamycin, an autophagy inductor, yielded opposite results depending on genetic background, suggesting the presence of pharmacogenomic modifiers. To identify them, we used a genotyped yeast panel designed for gene mapping and the NPC-mimetic U18666A (U18-drug) in the presence and absence of rapamycin. We evaluated cell growth, vacuolar fragmentation, and transcriptomics across diverse strains. Linkage analysis based on cell growth identified a significant locus, leading to the prioritization of nine genes. Notably, ccs1 (copper chaperone for superoxide dismutase) and avo2 (TORC2 subunit) deletions decreased cell growth compared to U18-Rapa in WT cells, while irc21 (DNA damage and ceramide metabolism) increased it. Our results suggest that genomic variants within these genes should be assessed before using rapamycin for NPC. This study represents a crucial step towards personalized rapamycin therapeutics.

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Publication Details

Journal
Journal of Inherited Metabolic Disease
Published
2026-06-18
DOI
https://doi.org/10.1002/jimd.70214
Primary Topic
Amyotrophic Lateral Sclerosis Research
Type
article
Field-Weighted Citation Impact
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article

A Rapamycin Pharmacogenomic Approach for the Childhood Dementia N iemann‐ P ick C

Juan Carlos Rubilar, Francisco A. Cubillos, Pablo David Villarreal, Valeria Olguín et al.
Journal of Inherited Metabolic Disease
Amyotrophic Lateral Sclerosis Research
article

A Rapamycin Pharmacogenomic Approach for the Childhood Dementia N iemann‐ P ick C

Juan Carlos Rubilar, Francisco A. Cubillos, Pablo David Villarreal, Valeria Olguín, Andrés D. Klein, Benjamín Szenfeld, Macarena Las Heras
article en

Abstract

mice, Rapamycin, an autophagy inductor, yielded opposite results depending on genetic background, suggesting the presence of pharmacogenomic modifiers. To identify them, we used a genotyped yeast panel designed for gene mapping and the NPC-mimetic U18666A (U18-drug) in the presence and absence of rapamycin. We evaluated cell growth, vacuolar fragmentation, and transcriptomics across diverse strains. Linkage analysis based on cell growth identified a significant locus, leading to the prioritization of nine genes. Notably, ccs1 (copper chaperone for superoxide dismutase) and avo2 (TORC2 subunit) deletions decreased cell growth compared to U18-Rapa in WT cells, while irc21 (DNA damage and ceramide metabolism) increased it. Our results suggest that genomic variants within these genes should be assessed before using rapamycin for NPC. This study represents a crucial step towards personalized rapamycin therapeutics.

Journal of Inherited Metabolic DiseaseVol. 49(4)
Universidad de Santiago de Chile (CL), Universidad Mayor (CL), Universidad del Desarrollo (CL), Clínica Alemana (CL), Millennium Nucleus of Ion Channel Associated Diseases (CL), Millennium Institute for Integrative Biology (CL)
Openalex Percentile: Top 6%
Amyotrophic Lateral Sclerosis Research
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