Interpreting Black-Box Models Across Domains with SHAP, LIME, and Counterfactuals

As black-box machine learning models—such as Random Forest and XGBoost ensemble frameworks—gain widespread adoption in high-stakes decision-making domains, the legal, moral, and technical demand for transparent and interpretable AI systems has grown immensely. This research presents a rigorous, multi-domain comparative evaluation of three prominent post-hoc Explainable AI (XAI) methodologies: SHAP (SHapley Additive exPlanations), LIME (Local Interpretable Model-agnostic Explanations), and Counterfactual Explanations (via DiCE). Using diverse, real-world tabular datasets representing the healthcare, finance, and demographic domains, this study benchmarks the selected XAI methods across three critical evaluation axes: explanation stability under localized input perturbations, human-centric practical interpretability, and computational runtime efficiency. The empirical experimental results reveal clear performance trade-offs among the evaluation paradigms: SHAP delivers highly faithful, theoretically robust, and consistent global and local feature attributions, albeit at a higher computational runtime expense. LIME serves as a highly efficient, fast alternative for real-time local instance-level explanations, though it exhibits greater sensitivity and fluctuation under subtle feature perturbations. Counterfactual Explanations (DiCE) complement feature-attribution strategies by providing actionable, human-comprehensible "what-if" scenarios that are highly valuable in clinical and financial decision-justification pathways. Ultimately, this paper bridges the gap between theoretical interpretability research and field application, introducing a standardized benchmarking infrastructure and practical, domain-specific recommendations to assist data science professionals in deploying reliable, accountable, and transparent machine learning workflows.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-06-17
DOI
https://doi.org/10.5281/zenodo.20729260
Primary Topic
Explainable Artificial Intelligence (XAI)
Type
preprint
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preprint

Interpreting Black-Box Models Across Domains with SHAP, LIME, and Counterfactuals

Dr. Vinoth Kumar V
Zenodo (CERN European Organization for Nuclear Research)
Explainable Artificial Intelligence (XAI)
preprint

Interpreting Black-Box Models Across Domains with SHAP, LIME, and Counterfactuals

Dr. Vinoth Kumar V
preprint en

Abstract

As black-box machine learning models—such as Random Forest and XGBoost ensemble frameworks—gain widespread adoption in high-stakes decision-making domains, the legal, moral, and technical demand for transparent and interpretable AI systems has grown immensely. This research presents a rigorous, multi-domain comparative evaluation of three prominent post-hoc Explainable AI (XAI) methodologies: SHAP (SHapley Additive exPlanations), LIME (Local Interpretable Model-agnostic Explanations), and Counterfactual Explanations (via DiCE). Using diverse, real-world tabular datasets representing the healthcare, finance, and demographic domains, this study benchmarks the selected XAI methods across three critical evaluation axes: explanation stability under localized input perturbations, human-centric practical interpretability, and computational runtime efficiency. The empirical experimental results reveal clear performance trade-offs among the evaluation paradigms: SHAP delivers highly faithful, theoretically robust, and consistent global and local feature attributions, albeit at a higher computational runtime expense. LIME serves as a highly efficient, fast alternative for real-time local instance-level explanations, though it exhibits greater sensitivity and fluctuation under subtle feature perturbations. Counterfactual Explanations (DiCE) complement feature-attribution strategies by providing actionable, human-comprehensible "what-if" scenarios that are highly valuable in clinical and financial decision-justification pathways. Ultimately, this paper bridges the gap between theoretical interpretability research and field application, introducing a standardized benchmarking infrastructure and practical, domain-specific recommendations to assist data science professionals in deploying reliable, accountable, and transparent machine learning workflows.

Zenodo (CERN European Organization for Nuclear Research)
Hindustan Institute of Technology and Science (IN)
Industry, innovation and infrastructure
Explainable Artificial Intelligence (XAI)
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