A palmitoylation signature for prognosis immune infiltration and drug sensitivity in esophageal carcinoma

Esophageal carcinoma (ESCA) has a poor prognosis. This study aimed to develop a palmitoylation-related signature (PRS) for ESCA prognosis and therapy prediction. Using scRNA-seq and bulk RNA-seq data from public databases, we constructed a signature via Cox and LASSO regression. It was validated internally and externally. Associations with clinical features, immune infiltration, tumor mutational burden (TMB), and drug sensitivity were analyzed. A 7-gene PRS was established, stratifying patients into risk groups with distinct outcomes (1–3 years AUCs: 0.698–0.805). High-risk patients showed altered immune infiltration, TMB, and drug sensitivity. The gene PAH was highly expressed in ESCA and promoted proliferation, migration, and invasion via PI3K/AKT pathway activation. Furthermore, this tumorigenic effect depends on its palmitoylation modification. In conclusion, the PRS can serve as an independent prognostic biomarker for ESCA, effectively predict prognosis and treatment response, and may represent a potential therapeutic target.

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Publication Details

Journal
iScience
Published
2026-06-17
DOI
https://doi.org/10.1016/j.isci.2026.116463
Primary Topic
Ferroptosis and cancer prognosis
Type
article
Field-Weighted Citation Impact
0.00

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article

A palmitoylation signature for prognosis immune infiltration and drug sensitivity in esophageal carcinoma

Quanjin Li, Wei Gan, Zhuo Lü, Yan He et al.
iScience
Ferroptosis and cancer prognosis
article

A palmitoylation signature for prognosis immune infiltration and drug sensitivity in esophageal carcinoma

Quanjin Li, Wei Gan, Zhuo Lü, Yan He, Xiaoyue Peng, Gang Wu, Chuan Xu, Guangxia Wei, Chunlin Ye, Shijun Wu, Xi Liu
article en

Abstract

Esophageal carcinoma (ESCA) has a poor prognosis. This study aimed to develop a palmitoylation-related signature (PRS) for ESCA prognosis and therapy prediction. Using scRNA-seq and bulk RNA-seq data from public databases, we constructed a signature via Cox and LASSO regression. It was validated internally and externally. Associations with clinical features, immune infiltration, tumor mutational burden (TMB), and drug sensitivity were analyzed. A 7-gene PRS was established, stratifying patients into risk groups with distinct outcomes (1–3 years AUCs: 0.698–0.805). High-risk patients showed altered immune infiltration, TMB, and drug sensitivity. The gene PAH was highly expressed in ESCA and promoted proliferation, migration, and invasion via PI3K/AKT pathway activation. Furthermore, this tumorigenic effect depends on its palmitoylation modification. In conclusion, the PRS can serve as an independent prognostic biomarker for ESCA, effectively predict prognosis and treatment response, and may represent a potential therapeutic target.

iScienceVol. 29(7)
Nanchang University (CN), First Affiliated Hospital of Jiangxi Medical College (CN), Nanfang Hospital (CN), Third Affiliated Hospital of Nanchang University (CN), Jiangxi Chest Hospital (CN), Binzhou People's Hospital (CN), Southern Medical University (CN)
Natural Science Foundation of Jiangxi Province, Education Department of Jiangxi Province, Health Commission of Jiangxi Province
No poverty
Openalex Percentile: Top 9%
Ferroptosis and cancer prognosis
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