Global One Health genomics identify conserved virulence and mobile resistance in the opportunistic pathogen <i>Staphylococcus saprophyticus</i>

AIMS: and evaluate the contribution of human, animal, food, and environmental strains to the dissemination of antimicrobial resistance and virulence traits within a One Health framework. MATERIALS AND METHODS: A total of 975 publicly available genomes were analyzed using comparative genomics to characterize the resistome, virulome, and mobilome. Associations between antimicrobial resistance genes and mobile genetic elements were assessed. Ribosomal multilocus sequence typing (rMLST) was used to investigate population structure and lineage distribution across sources and geographic regions. RESULTS: showed a global distribution across diverse hosts. A subset of rMLSTs (48500, 48501, 48492, and 48498) accounted for ~52% genomes and were widely distributed across countries and sources. Multidrug resistance was detected in all regions and frequently associated with plasmids, prophages, and integrative and conjugative elements, which together carried nearly half of resistance genes. In contrast, virulence determinants were largely chromosomal and conserved, supporting a stable pathogenic repertoire across ecological contexts. CONCLUSIONS: These findings highlight the circulation of dominant lineages across multiple reservoirs and identify non-clinical environments as important contributors to the spread of clinically relevant resistance and virulence traits.

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Publication Details

Journal
Future Microbiology
Published
2026-06-16
DOI
https://doi.org/10.1080/17460913.2026.2688716
Primary Topic
Antimicrobial Resistance in Staphylococcus
Type
article
Field-Weighted Citation Impact
0.00

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article

Global One Health genomics identify conserved virulence and mobile resistance in the opportunistic pathogen Staphylococcus saprophyticus

Giarlã Cunha da Silva, Ciro César Rossi
Future Microbiology
Antimicrobial Resistance in Staphylococcus
article

Global One Health genomics identify conserved virulence and mobile resistance in the opportunistic pathogen Staphylococcus saprophyticus

Giarlã Cunha da Silva, Ciro César Rossi
article en

Abstract

AIMS: and evaluate the contribution of human, animal, food, and environmental strains to the dissemination of antimicrobial resistance and virulence traits within a One Health framework. MATERIALS AND METHODS: A total of 975 publicly available genomes were analyzed using comparative genomics to characterize the resistome, virulome, and mobilome. Associations between antimicrobial resistance genes and mobile genetic elements were assessed. Ribosomal multilocus sequence typing (rMLST) was used to investigate population structure and lineage distribution across sources and geographic regions. RESULTS: showed a global distribution across diverse hosts. A subset of rMLSTs (48500, 48501, 48492, and 48498) accounted for ~52% genomes and were widely distributed across countries and sources. Multidrug resistance was detected in all regions and frequently associated with plasmids, prophages, and integrative and conjugative elements, which together carried nearly half of resistance genes. In contrast, virulence determinants were largely chromosomal and conserved, supporting a stable pathogenic repertoire across ecological contexts. CONCLUSIONS: These findings highlight the circulation of dominant lineages across multiple reservoirs and identify non-clinical environments as important contributors to the spread of clinically relevant resistance and virulence traits.

Future Microbiology
Universidade Federal de Viçosa (BR), Universidade Federal Fluminense (BR)
Conselho Nacional de Desenvolvimento Científico e Tecnológico, Fundação de Amparo à Pesquisa do Estado de Minas Gerais
Zero hunger
Openalex Percentile: Top 7%
Antimicrobial Resistance in Staphylococcus
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