A general data-driven framework for scalable electron tomography

Abstract Electron tomography (ET) is crucial for determining the three-dimensional (3D) structure of materials in real space but challenging due to the inherent missing-wedge, intensive-dose, and limited depth-of-field. Although deep learning can address these challenges in principle, the scarcity of ET data severely limits its application. In this study, we propose a general data-driven ET reconstruction framework that uses extensive and readily available random high-entropy projections to construct large-scale datasets. By integrating both real structural priors and depth-dependent imaging physics, the framework enables high-quality 3D reconstruction independent of specific materials or resolutions. Using this strategy, we successfully determine the 3D atomic structure of a 13-nm Pt nanoparticle containing 52 138 atoms, achieving a root-mean-square displacement of 22.6 pm; and the projection consistency error is significantly reduced, effectively expanding the depth-of-field limit of atomic-scale ET.

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Publication Details

Journal
National Science Review
Published
2026-06-16
DOI
https://doi.org/10.1093/nsr/nwag365
Primary Topic
Advanced Electron Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
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article

A general data-driven framework for scalable electron tomography

Lu Gan, Z L Chen, Huan Lei, Kuang Yu et al.
National Science Review
Advanced Electron Microscopy Techniques and Applications
article

A general data-driven framework for scalable electron tomography

Lu Gan, Z L Chen, Huan Lei, Kuang Yu, Wei Yinpin, Li J, Jie Yang, Han Li, Wenting Cui, Xuan Luo
article en

Abstract

Abstract Electron tomography (ET) is crucial for determining the three-dimensional (3D) structure of materials in real space but challenging due to the inherent missing-wedge, intensive-dose, and limited depth-of-field. Although deep learning can address these challenges in principle, the scarcity of ET data severely limits its application. In this study, we propose a general data-driven ET reconstruction framework that uses extensive and readily available random high-entropy projections to construct large-scale datasets. By integrating both real structural priors and depth-dependent imaging physics, the framework enables high-quality 3D reconstruction independent of specific materials or resolutions. Using this strategy, we successfully determine the 3D atomic structure of a 13-nm Pt nanoparticle containing 52 138 atoms, achieving a root-mean-square displacement of 22.6 pm; and the projection consistency error is significantly reduced, effectively expanding the depth-of-field limit of atomic-scale ET.

National Science Review
Tsinghua University (CN)
Sustainable cities and communities
Openalex Percentile: Top 8%
Advanced Electron Microscopy Techniques and Applications
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