Screening Biomarkers Related to Circadian Rhythm of Gastric Cancer Through Bioinformatics

Circadian rhythm (CR) dysregulation is increasingly recognized as a contributor to gastric cancer (GC) development, yet the biological and immunological consequences of CR-related alterations remain unclear. In this study, integrative transcriptomic analyses identified 147 CR-related differentially expressed genes in GC. Functional enrichment revealed significant involvement in circadian processes, cytokine activity, and immune-related signaling pathways. By applying three complementary machine learning algorithms, five robust hub genes (INHBA, DEPTOR, PDCD4, SELENBP1, and SIRT4) were identified. Among them, INHBA and SELENBP1 showed significant prognostic value, and SELENBP1 expression was strongly associated with immune infiltration patterns. Experimental validation confirmed that SELENBP1 overexpression suppressed GC cell proliferation, migration, and inflammatory cytokine secretion, and displayed a clear 24-h circadian oscillation. Collectively, these findings highlight key CR-related molecular alterations in GC and identify SELENBP1 as a promising diagnostic biomarker with potential immunoregulatory and circadian-dependent functional relevance.

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Publication Details

Journal
Applied Biochemistry and Biotechnology
Published
2026-06-13
DOI
https://doi.org/10.1007/s12010-026-05770-2
Primary Topic
Circadian rhythm and melatonin
Type
article
Field-Weighted Citation Impact
0.00
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article

Screening Biomarkers Related to Circadian Rhythm of Gastric Cancer Through Bioinformatics

Zhihui Xie, Yongting Lan, Y Y Dong, Fuxin Li et al.
Applied Biochemistry and Biotechnology
Circadian rhythm and melatonin
article

Screening Biomarkers Related to Circadian Rhythm of Gastric Cancer Through Bioinformatics

Zhihui Xie, Yongting Lan, Y Y Dong, Fuxin Li, Zequn Zhang
article en

Abstract

Circadian rhythm (CR) dysregulation is increasingly recognized as a contributor to gastric cancer (GC) development, yet the biological and immunological consequences of CR-related alterations remain unclear. In this study, integrative transcriptomic analyses identified 147 CR-related differentially expressed genes in GC. Functional enrichment revealed significant involvement in circadian processes, cytokine activity, and immune-related signaling pathways. By applying three complementary machine learning algorithms, five robust hub genes (INHBA, DEPTOR, PDCD4, SELENBP1, and SIRT4) were identified. Among them, INHBA and SELENBP1 showed significant prognostic value, and SELENBP1 expression was strongly associated with immune infiltration patterns. Experimental validation confirmed that SELENBP1 overexpression suppressed GC cell proliferation, migration, and inflammatory cytokine secretion, and displayed a clear 24-h circadian oscillation. Collectively, these findings highlight key CR-related molecular alterations in GC and identify SELENBP1 as a promising diagnostic biomarker with potential immunoregulatory and circadian-dependent functional relevance.

Applied Biochemistry and Biotechnology
Shandong University of Aeronautics (CN), Central Hospital of Zibo (CN)
Openalex Percentile: Top 8%
Circadian rhythm and melatonin
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