Tracking Gene Expression of Single Mitochondria in Live Neurons Using Nanotweezers
High Resolution Image Download MS PowerPoint Slide Neurons are highly polarized cells that depend on mitochondria for energy and signaling homeostasis. Importantly, energy and signaling requirements vary considerably across individual neurons both spatially and temporally. Therefore, to fully understand neuronal mitochondria, methods are needed to analyze mitochondria in live cells over time. The nanotweezer, a minimally invasive single-cell sampling technique, enables precise extraction of individual mitochondria from defined subcellular locations. Here, we combine single-mitochondrial extraction from live neurons with targeted mitochondrial gene expression tracking and mtDNA profiling to develop a platform for live-cell single-mitochondrion tracking and analysis. By tracking the expression of specific mitochondrially encoded genes in the same neurons over time, we reveal preliminary data showing a downregulation of mitochondrial genes MT-ND1 and MT-ATP6 following exposure to α-synuclein aggregates, independent of the proximity of the aggregates to the sampled mitochondria. Our approach provides a proof-of-concept for precise, temporal measurements of mitochondrial composition and targeted gene expression in vitro at single-organelle resolution, opening opportunities for single-cell and single-organelle studies of neuronal mitochondrial heterogeneity and its perturbation in models of neurodegeneration.
Authors
- Josef T. Kittler (ORCID: https://orcid.org/0000-0002-3437-9456)
- Flavie Lesept (ORCID: https://orcid.org/0000-0002-7398-9652)
- Michael J. Devine (ORCID: https://orcid.org/0000-0001-6076-3382)
- Aleksandar P. Ivanov (ORCID: https://orcid.org/0000-0003-1419-1381)
- Suzanne Claxton (ORCID: https://orcid.org/0000-0002-7708-4682)
- Joshua B. Edel (ORCID: https://orcid.org/0000-0001-5870-8659)
- Binoy Paulose Nadappuram (ORCID: https://orcid.org/0000-0002-1386-8357)
- Francesco Aprile (ORCID: https://orcid.org/0000-0002-4826-3091)
- Jack H. Howden (ORCID: https://orcid.org/0000-0001-9303-2076)
- Annie Sahota (ORCID: https://orcid.org/0000-0003-2923-1550)
- Siân C. Allerton (ORCID: https://orcid.org/0009-0005-6156-6707)
- Yaxian Liu (ORCID: https://orcid.org/0009-0008-0640-2920)
Institutions
- University of Strathclyde (GB)
- Neurosciences Institute (US)
- The Francis Crick Institute (GB)
- Institute of Molecular Biology (BG)
- National Hospital for Neurology and Neurosurgery (GB)
- Molecular Sciences Institute (US)
- University College London (GB)
- Imperial College London (GB)
Publication Details
- Journal
- Journal of the American Chemical Society
- Published
- 2026-06-09
- DOI
- https://doi.org/10.1021/jacs.6c02802
- Primary Topic
- Mitochondrial Function and Pathology
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Wellcome Trust
- Cancer Research UK
- Medical Research Scotland
- Engineering and Physical Sciences Research Council