Minimization of Disorder as a Key Design Principle for Natural Sizes of Light Harvesting 2 Complexes

analogues with 6- and 12-fold symmetries. To ensure reliable and efficient all-atomistic molecular dynamics simulations, we combined a well established interpolation approach for the construction of the potential energy surface with a neural network machine learning approach. Outcomes of these calculations clarify that non-natural forms of LH2-type complexes have significantly larger quasistatic disorder than those for the natural one. In addition, non-natural systems have more disruptions of the hydrogen bonding, underscoring its crucial role for reducing the disorder. On the other hand, local environmental dynamics are relatively insensitive to the structural changes although there is moderate enhancement in the anharmonic or interatomic components for the synthetic ones. These findings based on all-atomistic simulations provide direct computational evidence that the structure and sizes of natural LH2 complexes are designed to minimize the energetic disorder. We analyze quantitative implications of these for the energy transferring capability of the LH2 complex.

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Publication Details

Journal
The Journal of Physical Chemistry Letters
Published
2026-06-09
DOI
https://doi.org/10.1021/acs.jpclett.6c00794
Primary Topic
Photochromic and Fluorescence Chemistry
Type
article
Field-Weighted Citation Impact
0.00

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article

Minimization of Disorder as a Key Design Principle for Natural Sizes of Light Harvesting 2 Complexes

Young Min Rhee, Seogjoo Jang, Kwang Hyun Cho
The Journal of Physical Chemistry Letters
Photochromic and Fluorescence Chemistry
article

Minimization of Disorder as a Key Design Principle for Natural Sizes of Light Harvesting 2 Complexes

Young Min Rhee, Seogjoo Jang, Kwang Hyun Cho
article en

Abstract

analogues with 6- and 12-fold symmetries. To ensure reliable and efficient all-atomistic molecular dynamics simulations, we combined a well established interpolation approach for the construction of the potential energy surface with a neural network machine learning approach. Outcomes of these calculations clarify that non-natural forms of LH2-type complexes have significantly larger quasistatic disorder than those for the natural one. In addition, non-natural systems have more disruptions of the hydrogen bonding, underscoring its crucial role for reducing the disorder. On the other hand, local environmental dynamics are relatively insensitive to the structural changes although there is moderate enhancement in the anharmonic or interatomic components for the synthetic ones. These findings based on all-atomistic simulations provide direct computational evidence that the structure and sizes of natural LH2 complexes are designed to minimize the energetic disorder. We analyze quantitative implications of these for the energy transferring capability of the LH2 complex.

The Journal of Physical Chemistry Letters
Queens College, CUNY (US), The Graduate Center, CUNY (US), Korea Institute for Advanced Study (KR), Korea Advanced Institute of Science and Technology (KR), City University of New York (US)
National Research Foundation of Korea, Division of Chemistry, Basic Energy Sciences, Korea Institute for Advanced Study
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Openalex Percentile: Top 14%
Photochromic and Fluorescence Chemistry
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Minimization of Disorder as a Key Design Principle for Natural Sizes of Light Harvesting 2 Complexes — Young Min Rhee, Seogjoo Jang, et al. · The Journal of Physical Chemistry Letters (2026) | TGRS Research Map | TGRS