Discriminating Bacterial from Nonbacterial Lower Respiratory Tract Infection within Clinical Subgroups of Hospitalized Adults

We previously identified a blood-based 4-gene signature that accurately discriminates bacterial from nonbacterial acute respiratory infection (ARI) in 504 hospitalized adults (AUC = 0.90). Here we evaluate how well this global signature performs within subgroups of patients based on underlying lung disease or presence of pneumonia, comparing it to newly developed subgroup-specific signatures assessing whether performance is improved by tailoring unique gene signatures to homogeneous subgroups. Our global gene signature strongly discriminated bacterial from nonbacterial ARI within every clinical subgroup including pneumonia (AUC = 0.77-0.94), and outperformed every subgroup-specific signature (AUC = 0.57-0.90), suggesting broad applicability in adults with ARI.

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Publication Details

Journal
The Journal of Infectious Diseases
Published
2026-06-08
DOI
https://doi.org/10.1093/infdis/jiag297
Primary Topic
Bacterial Identification and Susceptibility Testing
Type
article
Field-Weighted Citation Impact
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article

Discriminating Bacterial from Nonbacterial Lower Respiratory Tract Infection within Clinical Subgroups of Hospitalized Adults

Daniel P. Croft, Derick R. Peterson, Andrea Baran, Thomas J. Mariani et al.
The Journal of Infectious Diseases
Bacterial Identification and Susceptibility Testing
article

Discriminating Bacterial from Nonbacterial Lower Respiratory Tract Infection within Clinical Subgroups of Hospitalized Adults

Daniel P. Croft, Derick R. Peterson, Andrea Baran, Thomas J. Mariani, Soumyaroop Bhattacharya, Angela R Branche, Ann R Falsey, Edward E Walsh
article en

Abstract

We previously identified a blood-based 4-gene signature that accurately discriminates bacterial from nonbacterial acute respiratory infection (ARI) in 504 hospitalized adults (AUC = 0.90). Here we evaluate how well this global signature performs within subgroups of patients based on underlying lung disease or presence of pneumonia, comparing it to newly developed subgroup-specific signatures assessing whether performance is improved by tailoring unique gene signatures to homogeneous subgroups. Our global gene signature strongly discriminated bacterial from nonbacterial ARI within every clinical subgroup including pneumonia (AUC = 0.77-0.94), and outperformed every subgroup-specific signature (AUC = 0.57-0.90), suggesting broad applicability in adults with ARI.

The Journal of Infectious Diseases
Center for Children (US), University of Rochester (US)
Reduced inequalities
Openalex Percentile: Top 7%
Bacterial Identification and Susceptibility Testing
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Discriminating Bacterial from Nonbacterial Lower Respiratory Tract Infection within Clinical Subgroups of Hospitalized Adults — Daniel P. Croft, Derick R. Peterson, et al. · The Journal of Infectious Diseases (2026) | TGRS Research Map | TGRS