Rapid Determination of Drug-To-Antibody Ratios Using Ultrafast Microdroplet Digestion Technology

Abstract Accurate determination of drug-to-antibody ratios (DARs) is essential for the development, quality control, and performance evaluation of antibody−drug conjugates (ADCs); yet conventional analytical approaches often require extensive sample preparation, long analysis time, and substantial sample consumption. The peak distribution of intact ADCs is highly complex due to inherent glycosylation heterogeneity and variable drug conjugation. By applying enzymatic digestion, ADC can be converted into smaller subunits or deglycosylated species, thereby significantly simplifying the mass spectral profile. This reduction in structural heterogeneity facilitates clearer peak assignment and enables more accurate and reliable DAR quantification. Herein, we report an ultrafast microdroplet digestion−mass spectrometry strategy for rapid DAR characterization of ADCs. Following offline desalting and buffer exchange, ADC samples were subjected to automated online microdroplet-assisted enzymatic digestion coupled with flow-injection mass spectrometry. This approach integrates enzymatic processing and mass spectrometric detection without chromatographic separation, enabling a 1 min FIA-MS acquisition cycle per sample. The method was validated using NIST monoclonal antibody (mAb) conjugated to ADC mimics spanning low to high DAR (0−14) ranges, Cetuximab-derived ADC mimics (DAR∼5) with complex glycosylation, and the commercial ADC Kadcyla (DAR∼3.5). Consistent DAR values were obtained across multiple enzymatic workflows (IdeS, EndoS2, and EndoF3) with good reproducibility (%CV typically <5%). The approach provides rapid online subunit-level DAR characterization while retaining an offline sample preparation requirement.

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Publication Details

Journal
ACS Measurement Science Au
Published
2026-11-11
DOI
https://doi.org/10.1021/acsmeasuresciau.6c00327
Primary Topic
Mass Spectrometry Techniques and Applications
Type
article
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article

Rapid Determination of Drug-To-Antibody Ratios Using Ultrafast Microdroplet Digestion Technology

Harsha P. Gunawardena, Timothy Yaroshuk, Baatar Munkhtsetseg, Xi Qiu et al.
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ACS Measurement Science Au
Mass Spectrometry Techniques and Applications
article

Rapid Determination of Drug-To-Antibody Ratios Using Ultrafast Microdroplet Digestion Technology

Harsha P. Gunawardena, Timothy Yaroshuk, Baatar Munkhtsetseg, Xi Qiu, Karen Yao Luo, Praneeth Ivan Joel Fnu, Hao Chen, Hui Zhao, M. Hassan, Jim Lau, Mike Knierman, Thomas Walker, Juana Perez Sancheza, Yongqing Yang
article en

Abstract

Abstract Accurate determination of drug-to-antibody ratios (DARs) is essential for the development, quality control, and performance evaluation of antibody−drug conjugates (ADCs); yet conventional analytical approaches often require extensive sample preparation, long analysis time, and substantial sample consumption. The peak distribution of intact ADCs is highly complex due to inherent glycosylation heterogeneity and variable drug conjugation. By applying enzymatic digestion, ADC can be converted into smaller subunits or deglycosylated species, thereby significantly simplifying the mass spectral profile. This reduction in structural heterogeneity facilitates clearer peak assignment and enables more accurate and reliable DAR quantification. Herein, we report an ultrafast microdroplet digestion−mass spectrometry strategy for rapid DAR characterization of ADCs. Following offline desalting and buffer exchange, ADC samples were subjected to automated online microdroplet-assisted enzymatic digestion coupled with flow-injection mass spectrometry. This approach integrates enzymatic processing and mass spectrometric detection without chromatographic separation, enabling a 1 min FIA-MS acquisition cycle per sample. The method was validated using NIST monoclonal antibody (mAb) conjugated to ADC mimics spanning low to high DAR (0−14) ranges, Cetuximab-derived ADC mimics (DAR∼5) with complex glycosylation, and the commercial ADC Kadcyla (DAR∼3.5). Consistent DAR values were obtained across multiple enzymatic workflows (IdeS, EndoS2, and EndoF3) with good reproducibility (%CV typically <5%). The approach provides rapid online subunit-level DAR characterization while retaining an offline sample preparation requirement.

ACS Measurement Science Au
New Jersey Institute of Technology (US), Johnson & Johnson (United States) (US), Agilent Technologies (United States) (US), National University of Mongolia (MN)
Good health and well-being
Mass Spectrometry Techniques and Applications
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