Predicting Bacterial Radiation Resistance Through Identifying Novel Genomic Features

Radiation resistance in bacteria is a critical trait with implications for biotechnology, medicine and environmental science. Deinococcus species possess unique genomic features that enable their extraordinary survival in extreme environments. However, the diversity of radiation resistance mechanisms across bacteria remains poorly explored. Here, we analysed the genomic diversity and functional gene repertoire of Deinococcus and extended the analysis to a broader set of radiation-resistant bacteria. We found that highly resistant strains tend to have smaller genomes and harbour more genes positively associated with radiation resistance, highlighting their potential roles in sustaining cellular homeostasis under radiation-induced stress. By integrating machine learning with curated genomic datasets, we identified key resistance-associated gene signatures and developed a predictive tool to quantify bacterial radiation resistance. This study offers new insights into the genomic basis of radiation resistance and provides a practical framework for its assessment in environmental and microbial engineering applications.

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Publication Details

Journal
Environmental Microbiology
Published
2026-05-29
DOI
https://doi.org/10.1111/1462-2920.70338
Primary Topic
Effects of Radiation Exposure
Type
article
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Predicting Bacterial Radiation Resistance Through Identifying Novel Genomic Features

Chao Fang, Liying Zhu, Z L Zhang, Boyang Ji et al.
Environmental Microbiology
Effects of Radiation Exposure
article

Predicting Bacterial Radiation Resistance Through Identifying Novel Genomic Features

Chao Fang, Liying Zhu, Z L Zhang, Boyang Ji, Zhengming Zhu, Li Li, Tongrong Zhang, Ling Jiang, Jiayu Liu
article en

Abstract

Radiation resistance in bacteria is a critical trait with implications for biotechnology, medicine and environmental science. Deinococcus species possess unique genomic features that enable their extraordinary survival in extreme environments. However, the diversity of radiation resistance mechanisms across bacteria remains poorly explored. Here, we analysed the genomic diversity and functional gene repertoire of Deinococcus and extended the analysis to a broader set of radiation-resistant bacteria. We found that highly resistant strains tend to have smaller genomes and harbour more genes positively associated with radiation resistance, highlighting their potential roles in sustaining cellular homeostasis under radiation-induced stress. By integrating machine learning with curated genomic datasets, we identified key resistance-associated gene signatures and developed a predictive tool to quantify bacterial radiation resistance. This study offers new insights into the genomic basis of radiation resistance and provides a practical framework for its assessment in environmental and microbial engineering applications.

Environmental MicrobiologyVol. 28(6)
Nanjing Tech University (CN), Nanjing University of Industry Technology (CN), Xinjiang Academy of Agricultural Sciences (CN), BioInnovation Institute (DK), Zhejiang University (CN)
Life in Land
Openalex Percentile: Top 5%
Effects of Radiation Exposure
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