AI-driven text mining of the female reproductive system: enabling multiscale biomedical modeling and personalized medicine

The female reproductive system, including the endometrium, placenta, ovary, cervix, and fallopian tube, plays a critical role in conception, implantation, and fetal development. Recent advances in bioengineered models such as organoids, organ-on-a-chip platforms, and 3D bioprinting have expanded experimental capabilities, however, the rapid growth of this field has resulted in a large and fragmented body of literature, limiting systematic integration and analysis. Here, we present an artificial intelligence (AI)-driven text mining framework to systematically map research trends in the female reproductive system. A total of 347 peer-reviewed articles were collected and analyzed. Abstracts were embedded using BioBERT to capture contextual biomedical semantics. Subsequently, unsupervised topic modeling was performed using BERTopic with UMAP-based dimensionality reduction and HDBSCAN clustering. This analysis identified 15 fine-grained subtopics, which were further consolidated into six major thematic categories. The results show that current research is mainly focused on endometrial receptivity and implantation, placental barrier function and maternal-fetal interface, and tissue regeneration and biofabrication. In contrast, integrated multi-organ modeling and translational validation remain relatively underexplored. Overall, this AI-driven framework provides a quantitative and scalable approach to organizing complex biomedical literature. The findings offer a structured overview of the field and highlight emerging directions for multiscale modeling and personalized reproductive medicine.

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Publication Details

Journal
Nano Convergence
Published
2026-05-30
DOI
https://doi.org/10.1186/s40580-026-00554-0
Primary Topic
Reproductive System and Pregnancy
Type
article
Field-Weighted Citation Impact
0.00

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article

AI-driven text mining of the female reproductive system: enabling multiscale biomedical modeling and personalized medicine

Jungho Ahn, Seokyoung Bang, Heejin Woo, H S Kim et al.
Nano Convergence
Reproductive System and Pregnancy
article

AI-driven text mining of the female reproductive system: enabling multiscale biomedical modeling and personalized medicine

Jungho Ahn, Seokyoung Bang, Heejin Woo, H S Kim, Seo Yeon Kim, Jungseub Lee, G S Lee, Ju Yeon Lee, Jongwoo Ahn, Sieun Shin, Susik Yoon, Sharon Jeeho Ham, Jeehyo Jeon
article en

Abstract

The female reproductive system, including the endometrium, placenta, ovary, cervix, and fallopian tube, plays a critical role in conception, implantation, and fetal development. Recent advances in bioengineered models such as organoids, organ-on-a-chip platforms, and 3D bioprinting have expanded experimental capabilities, however, the rapid growth of this field has resulted in a large and fragmented body of literature, limiting systematic integration and analysis. Here, we present an artificial intelligence (AI)-driven text mining framework to systematically map research trends in the female reproductive system. A total of 347 peer-reviewed articles were collected and analyzed. Abstracts were embedded using BioBERT to capture contextual biomedical semantics. Subsequently, unsupervised topic modeling was performed using BERTopic with UMAP-based dimensionality reduction and HDBSCAN clustering. This analysis identified 15 fine-grained subtopics, which were further consolidated into six major thematic categories. The results show that current research is mainly focused on endometrial receptivity and implantation, placental barrier function and maternal-fetal interface, and tissue regeneration and biofabrication. In contrast, integrated multi-organ modeling and translational validation remain relatively underexplored. Overall, this AI-driven framework provides a quantitative and scalable approach to organizing complex biomedical literature. The findings offer a structured overview of the field and highlight emerging directions for multiscale modeling and personalized reproductive medicine.

Nano ConvergenceVol. 13(1)
Korea University (KR), Dongguk University (KR), CHA University (KR), Korea University (JP), Sungkyunkwan University (KR)
National Research Foundation of Korea, Health Promotion Administration, Ministry of Health and Welfare, National Institute of Dental and Craniofacial Research
Gender equality
Openalex Percentile: Top 8%
Reproductive System and Pregnancy
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