Telomere-to-telomere genome assemblies of male and female greater amberjack (Seriola dumerili)

The greater amberjack (Seriola dumerili) is a globally important pelagic fish valued for its rapid growth, superior flesh quality, and high aquaculture potential. Here, we report the first telomere-to-telomere (T2T) chromosome-level genome assemblies for male and female S. dumerili generated through an integrated sequencing strategy combining Pacific Biosciences High-Fidelity (PacBio HiFi) long reads, MGI (MGI Technology, Inc.) short reads, and Hi-C (chromosome conformation capture) data.The assemblies spanned 685 Mb (female) and 683 Mb (male), each anchored to 24 chromosomes and exhibiting near-complete continuity and accuracy. Both genomes achieved exceptional completeness, with over 99.3% of the BUSCO genes identified, and contained 22,352 and 22,325 annotated protein-coding genes, respectively. The availability of these T2T genomes provides a comprehensive resource for investigating sex-specific genomic features, evolutionary adaptation, and functional mechanisms underlying growth and disease resistance, thereby advancing molecular breeding and sustainable aquaculture of the greater amberjack.

Authors

Institutions

Publication Details

Journal
Scientific Data
Published
2026-05-29
DOI
https://doi.org/10.1038/s41597-026-07505-8
Primary Topic
Telomeres, Telomerase, and Senescence
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Telomere-to-telomere genome assemblies of male and female greater amberjack (Seriola dumerili)

Shaosen Yang, R X Zhang, Jianchao Chen, Binwei Duan et al.
Scientific Data
Telomeres, Telomerase, and Senescence
article

Telomere-to-telomere genome assemblies of male and female greater amberjack (Seriola dumerili)

Shaosen Yang, R X Zhang, Jianchao Chen, Binwei Duan, J I A H U I Wu, Kai Zhang, Yanping Li, Yunyun Lv, Zelin Weng
article en

Abstract

The greater amberjack (Seriola dumerili) is a globally important pelagic fish valued for its rapid growth, superior flesh quality, and high aquaculture potential. Here, we report the first telomere-to-telomere (T2T) chromosome-level genome assemblies for male and female S. dumerili generated through an integrated sequencing strategy combining Pacific Biosciences High-Fidelity (PacBio HiFi) long reads, MGI (MGI Technology, Inc.) short reads, and Hi-C (chromosome conformation capture) data.The assemblies spanned 685 Mb (female) and 683 Mb (male), each anchored to 24 chromosomes and exhibiting near-complete continuity and accuracy. Both genomes achieved exceptional completeness, with over 99.3% of the BUSCO genes identified, and contained 22,352 and 22,325 annotated protein-coding genes, respectively. The availability of these T2T genomes provides a comprehensive resource for investigating sex-specific genomic features, evolutionary adaptation, and functional mechanisms underlying growth and disease resistance, thereby advancing molecular breeding and sustainable aquaculture of the greater amberjack.

Scientific Data
Shenzhen University (CN), Key Laboratory of Guangdong Province (CN), Neijiang Normal University (CN)
Basic and Applied Basic Research Foundation of Guangdong Province
Responsible consumption and production
Openalex Percentile: Top 6%
Telomeres, Telomerase, and Senescence
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.