Localization of Spatiotemporally Heterogeneous Subsurface Flows Using Autoencoder‐Based Deep Learning Framework for Time‐Lapse Self‐Potential Tomography

Abstract Self‐potential (SP) monitoring has emerged as a valuable method for characterizing subsurface hydrogeological features and processes due to its sensitivity to fluid‐induced electrokinetic effects. Despite advancements in SP inversion, challenges remain in imaging groundwater dynamics from SP activities due to complex hydrological settings and transient noise. In this study, a deep learning autoencoder (AE)‐based framework is proposed for the spatiotemporal localization of subsurface fluid movement from time‐lapse SP tomography. Temporal segments of time‐lapse numerical inversions were first derived from long‐term SP monitoring conducted from a floodplain site in Oak Ridge, Tennessee, known for active hyporheic exchange. Subsequently, AE models based on vision transformer (ViT), convolutional long short‐term memory (ConvLSTM), convolutional neural network, and temporal convolutional network were individually trained and compared on the SP tomography segments for reconstruction performance. Finally, the reconstruction error over time serves as an anomaly score to identify moments of active SP variation, whereas spatial distributions of errors within these moments are analyzed to image and localize regions associated with anomalous subsurface fluid movement. The results demonstrate that ConvLSTM‐ and ViT‐AE are most capable for the localization task with contrasting error distributions and consistent delineation of anomalies. Applying the method to both SP arrays parallel and perpendicular to the stream produced consistent anomaly zones near a fault or karst feature, validating the robustness and generalization of the approach. These results demonstrate the potential of the proposed framework as a scalable and interpretable tool for spatiotemporal analysis of subsurface flow dynamics in complex hydrogeological systems.