Mutation landscape and pathway-level disparities in Black versus White patients with acute myeloid leukemia.

6534 Background: Racial disparities in acute myeloid leukemia (AML) outcomes are well-documented, yet race- specific genomic differences remain incompletely characterized. Current risk stratification systems, developed from European-ancestry cohorts, may inadequately classify patients (pts) of African ancestry (Stiff, Nature Genetics , 2024). We performed comprehensive clinicogenomic analysis to identify race-specific mutation patterns and their clinical impact in AML. Methods: We analyzed genomic and outcomes data on AML pts in AACR Project GENIE database. Mutation frequencies, co-mutation patterns, and pathway alterations were compared between racial groups. Survival analyses used Cox proportional hazards models adjusted for age and sex. Multiple comparison correction used Benjamini-Hochberg false discovery rate (FDR). Results: Our study included 2,359 pts (Black, n=243; White, n=2,116). Black pts demonstrated a distinct mutational landscape with fewer splicing factor ( SRSF2, U2AF1, SF3B1 ) mutations (11.1% vs 20.1%, FDR p=0.003) and tumor suppressor ( TP53, WT1 ) mutations (11.9% vs. 18.2%, FDR p=0.038). Signaling/RAS pathway mutations were nominally higher in Blacks. A notable finding was the emergence of MDS-related gene mutations in Black pts at a younger age, suggesting distinct disease biology. Among pts aged <40 years, ASXL1 mutations were more prevalent in Blacks (10.2% vs. 1.8%, p=0.006). Co-mutation architectures differed substantially by race: in Black pts, ASXL1 and RUNX1 frequently co-occurred with RAS/MAPK pathway mutations (ASXL1+RAS: 7.8% vs. 3.4%, FDR p=0.006), whereas White pts had predominant co-occurrence of ASXL1 and RUNX1 with splicing factor mutations Critical survival disparities emerged by mutation status. NPM1+FLT3 co-mutation was less common in Blacks (3.3% vs. 7.0%, FDR p=0.028) and conferred markedly inferior survival when present (median OS 6.7 vs. 14.6 months, p=0.008). Strikingly, favorable-risk mutations showed race-specific effects. NPM1-only (HR 0.79, p=0.014), IDH1-only (HR 0.68, p=0.005), and NPM1+IDH1 (HR 0.61, p=0.013) were protective in White but not in Black pts: NPM1-only (HR 0.89, p=0.76), IDH1-only (HR 0.84, p=0.71), NPM1+IDH1 (HR 0.34, p=0.13), challenging current risk stratification's universal applicability. Overall survival (OS) was similar (median OS- 18 vs. 16.7 months), though propensity-matched analysis trended toward worse outcomes in Blacks (18 vs. 25 months, p=0.091). Conclusions: Black AML pts exhibit fundamentally distinct molecular biology with differential pathway involvement, earlier MDS-related mutations, unique co-mutation patterns, and loss of prognostic value for traditionally favorable mutations. These findings demonstrate that race-blind risk stratification may systematically misclassify Black pts, supporting urgent need for ancestry-informed precision medicine approaches in AML.

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Journal
Journal of Clinical Oncology
Published
2026-05-27
DOI
https://doi.org/10.1200/jco.2026.44.16_suppl.6534
Primary Topic
Acute Myeloid Leukemia Research
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article
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article

Mutation landscape and pathway-level disparities in Black versus White patients with acute myeloid leukemia.

Alankrita Taneja, Somedeb Ball, Olanipekun Lanny Ntukidem, Kateryna Fedorov et al.
Journal of Clinical Oncology
Acute Myeloid Leukemia Research
article

Mutation landscape and pathway-level disparities in Black versus White patients with acute myeloid leukemia.

Alankrita Taneja, Somedeb Ball, Olanipekun Lanny Ntukidem, Kateryna Fedorov, Sanjay Mohan, Chidiebube Ugwu, Jude O. Ossai, Matthew Villaume, Tarfa Verinumbe
article en

Abstract

6534 Background: Racial disparities in acute myeloid leukemia (AML) outcomes are well-documented, yet race- specific genomic differences remain incompletely characterized. Current risk stratification systems, developed from European-ancestry cohorts, may inadequately classify patients (pts) of African ancestry (Stiff, Nature Genetics , 2024). We performed comprehensive clinicogenomic analysis to identify race-specific mutation patterns and their clinical impact in AML. Methods: We analyzed genomic and outcomes data on AML pts in AACR Project GENIE database. Mutation frequencies, co-mutation patterns, and pathway alterations were compared between racial groups. Survival analyses used Cox proportional hazards models adjusted for age and sex. Multiple comparison correction used Benjamini-Hochberg false discovery rate (FDR). Results: Our study included 2,359 pts (Black, n=243; White, n=2,116). Black pts demonstrated a distinct mutational landscape with fewer splicing factor ( SRSF2, U2AF1, SF3B1 ) mutations (11.1% vs 20.1%, FDR p=0.003) and tumor suppressor ( TP53, WT1 ) mutations (11.9% vs. 18.2%, FDR p=0.038). Signaling/RAS pathway mutations were nominally higher in Blacks. A notable finding was the emergence of MDS-related gene mutations in Black pts at a younger age, suggesting distinct disease biology. Among pts aged <40 years, ASXL1 mutations were more prevalent in Blacks (10.2% vs. 1.8%, p=0.006). Co-mutation architectures differed substantially by race: in Black pts, ASXL1 and RUNX1 frequently co-occurred with RAS/MAPK pathway mutations (ASXL1+RAS: 7.8% vs. 3.4%, FDR p=0.006), whereas White pts had predominant co-occurrence of ASXL1 and RUNX1 with splicing factor mutations Critical survival disparities emerged by mutation status. NPM1+FLT3 co-mutation was less common in Blacks (3.3% vs. 7.0%, FDR p=0.028) and conferred markedly inferior survival when present (median OS 6.7 vs. 14.6 months, p=0.008). Strikingly, favorable-risk mutations showed race-specific effects. NPM1-only (HR 0.79, p=0.014), IDH1-only (HR 0.68, p=0.005), and NPM1+IDH1 (HR 0.61, p=0.013) were protective in White but not in Black pts: NPM1-only (HR 0.89, p=0.76), IDH1-only (HR 0.84, p=0.71), NPM1+IDH1 (HR 0.34, p=0.13), challenging current risk stratification's universal applicability. Overall survival (OS) was similar (median OS- 18 vs. 16.7 months), though propensity-matched analysis trended toward worse outcomes in Blacks (18 vs. 25 months, p=0.091). Conclusions: Black AML pts exhibit fundamentally distinct molecular biology with differential pathway involvement, earlier MDS-related mutations, unique co-mutation patterns, and loss of prognostic value for traditionally favorable mutations. These findings demonstrate that race-blind risk stratification may systematically misclassify Black pts, supporting urgent need for ancestry-informed precision medicine approaches in AML.

Journal of Clinical OncologyVol. 44(16_suppl)
Newark Beth Israel Medical Center (US), Trinity Health (US), Vanderbilt University (US), Jefferson Einstein Philadelphia Hospital (US), Jefferson Hospital (US), Vanderbilt-Ingram Cancer Center, Vanderbilt University Medical Center (US)
Openalex Percentile: Top 9%
Acute Myeloid Leukemia Research
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