Machine learning, whole genome sequencing, and Mendelian randomization support a role of CRP on COVID-19 severity

BACKGROUND: The coronavirus disease 2019 (COVID-19) ranges from asymptomatic to very severe infection and death, largely depending on host factors, including genetics. We have investigated clinical and genetic data from 200 COVID-19 patients to search for factors predisposing to increased disease severity. METHODS: Patients were divided into non-hospitalized mild/pauci-symptomatic and hospitalized severe. An interpretable Machine Learning approach was applied to blood biomarkers while genome-wide associations were performed for COVID-19 severity. Finally, a possible causal role of chronic low-grade inflammation on COVID-19 severity was searched by Mendelian Randomization. RESULTS: A high severity predictive role was observed in our sample by Machine Learning for the C-Reactive Protein measured in the course of SARS-CoV-2 infection (iCRP). This was also suggested by evidence of association with variants known to be involved in the CRP levels in the general population (pCRP). Finally, a possible causal role of chronic low-grade inflammation on COVID-19 severity could be shown by Mendelian Randomization using publicly available summary statistics of two COVID-19 Genome-Wide Association Studies. CONCLUSIONS: Consistent with previous results, a predictive role of CRP levels on COVID-19 severity was detected in our sample. Furthermore, Mendelian Randomization supported a causal role of genetically predicted chronic CRP levels.

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Publication Details

Journal
Molecular Medicine
Published
2026-05-27
DOI
https://doi.org/10.1186/s10020-026-01512-6
Primary Topic
COVID-19 Clinical Research Studies
Type
article
Field-Weighted Citation Impact
0.00

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article

Machine learning, whole genome sequencing, and Mendelian randomization support a role of CRP on COVID-19 severity

Isabella Ceccherini, Sergio Decherchi, Marta Rusmini, Fabio Landuzzi et al.
Molecular Medicine
COVID-19 Clinical Research Studies
article

Machine learning, whole genome sequencing, and Mendelian randomization support a role of CRP on COVID-19 severity

Isabella Ceccherini, Sergio Decherchi, Marta Rusmini, Fabio Landuzzi, Ilaria Ferrigno, Pier Luigi Meroni, Andrea Angius, Francesca Rosamilia, Paolo Uva, Stefania Croci, Annamaria Pezzarossi, Davide Cangelosi, Martina Bonacini, Francesca Lantieri, Vincenzo Rallo, Diego Vozzi, Mariagrazia Catanoso, Paolo Giorgi Rossi, Pamela Mancuso, Yeraldin Chiquinquira Castillo De Spelorzi, Alessandro Rossi, Carlo Salvarani, Marco Gattorno, Andrea Cavalli, Giada Recchi, Edoardo Henzen
article en

Abstract

BACKGROUND: The coronavirus disease 2019 (COVID-19) ranges from asymptomatic to very severe infection and death, largely depending on host factors, including genetics. We have investigated clinical and genetic data from 200 COVID-19 patients to search for factors predisposing to increased disease severity. METHODS: Patients were divided into non-hospitalized mild/pauci-symptomatic and hospitalized severe. An interpretable Machine Learning approach was applied to blood biomarkers while genome-wide associations were performed for COVID-19 severity. Finally, a possible causal role of chronic low-grade inflammation on COVID-19 severity was searched by Mendelian Randomization. RESULTS: A high severity predictive role was observed in our sample by Machine Learning for the C-Reactive Protein measured in the course of SARS-CoV-2 infection (iCRP). This was also suggested by evidence of association with variants known to be involved in the CRP levels in the general population (pCRP). Finally, a possible causal role of chronic low-grade inflammation on COVID-19 severity could be shown by Mendelian Randomization using publicly available summary statistics of two COVID-19 Genome-Wide Association Studies. CONCLUSIONS: Consistent with previous results, a predictive role of CRP levels on COVID-19 severity was detected in our sample. Furthermore, Mendelian Randomization supported a causal role of genetically predicted chronic CRP levels.

Molecular Medicine
University of Modena and Reggio Emilia (IT), University of Cagliari (IT), Istituto Giannina Gaslini (IT), Italian Institute of Technology (IT), Azienda Sanitaria Unità Locale di Reggio Emilia (IT), IRCCS Istituto Auxologico Italiano (IT), Istituti di Ricovero e Cura a Carattere Scientifico (IT), École Polytechnique Fédérale de Lausanne (CH), University of Genoa (IT)
Ministero della Salute, Foundation for Research in Rheumatology
Good health and well-being
Openalex Percentile: Top 7%
COVID-19 Clinical Research Studies
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