Bridging Annotation Gaps: Hierarchical Self-Support Learning for Brain Tumor Segmentation

Background: Accurate brain tumor segmentation from Magnetic Resonance Imaging (MRI) depends on the fusion of multiple complementary modalities. However, clinical practice often faces incomplete modality sets due to acquisition failures, patient contraindications, or protocol variations. Current methods either treat each modality feature extractor in isolation or depend on computationally expensive teacher networks for cross-modal knowledge transfer. Objective: This paper presents Hierarchical Adaptive Group Self-Support Learning with Boundary-Aware Calibration (HAGSS), a framework that overcomes three key limitations of existing group self-support methods: static group formation that ignores temporal prediction quality, uniform treatment of boundary and interior voxels, and distribution mismatch across heterogeneous modality logits. Methods: We propose a hierarchical adaptive group formation mechanism that reassigns group leader roles at each epoch based on voxel-level prediction confidence scores instead of fixed sensitivity priors. We also introduce a boundary-aware calibration module that applies spatially varied distillation weights with greater emphasis on tumor boundary regions. In addition, we design a cross-scale consistency regularization term that enforces agreement between multi-resolution predictions to stabilize the self-support target. Results: Experiments on BraTS2020, BraTS2018, and BraTS2021 datasets show that HAGSS achieves consistent improvements over state-of-the-art baselines. The average Dice gains across the whole tumor, tumor core, and enhancing tumor regions reach 1.30% on BraTS2020 and 1.61% on BraTS2021 compared to existing methods. All improvements are statistically significant (p<0.05). Conclusions: HAGSS operates exclusively during training, adds no parameters or inference cost, and can be applied as a plug-in module to any multi-encoder incomplete multi-modal segmentation architecture. Code is publicly available at GitHub.

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Publication Details

Journal
Diagnostics
Published
2026-05-22
DOI
https://doi.org/10.3390/diagnostics16111588
Primary Topic
Advanced Neural Network Applications
Type
article
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article

Bridging Annotation Gaps: Hierarchical Self-Support Learning for Brain Tumor Segmentation

Zubair Ashraf, Saqib Qamar, Mohd Fazil
Diagnostics
Advanced Neural Network Applications
article

Bridging Annotation Gaps: Hierarchical Self-Support Learning for Brain Tumor Segmentation

Zubair Ashraf, Saqib Qamar, Mohd Fazil
article en

Abstract

Background: Accurate brain tumor segmentation from Magnetic Resonance Imaging (MRI) depends on the fusion of multiple complementary modalities. However, clinical practice often faces incomplete modality sets due to acquisition failures, patient contraindications, or protocol variations. Current methods either treat each modality feature extractor in isolation or depend on computationally expensive teacher networks for cross-modal knowledge transfer. Objective: This paper presents Hierarchical Adaptive Group Self-Support Learning with Boundary-Aware Calibration (HAGSS), a framework that overcomes three key limitations of existing group self-support methods: static group formation that ignores temporal prediction quality, uniform treatment of boundary and interior voxels, and distribution mismatch across heterogeneous modality logits. Methods: We propose a hierarchical adaptive group formation mechanism that reassigns group leader roles at each epoch based on voxel-level prediction confidence scores instead of fixed sensitivity priors. We also introduce a boundary-aware calibration module that applies spatially varied distillation weights with greater emphasis on tumor boundary regions. In addition, we design a cross-scale consistency regularization term that enforces agreement between multi-resolution predictions to stabilize the self-support target. Results: Experiments on BraTS2020, BraTS2018, and BraTS2021 datasets show that HAGSS achieves consistent improvements over state-of-the-art baselines. The average Dice gains across the whole tumor, tumor core, and enhancing tumor regions reach 1.30% on BraTS2020 and 1.61% on BraTS2021 compared to existing methods. All improvements are statistically significant (p<0.05). Conclusions: HAGSS operates exclusively during training, adds no parameters or inference cost, and can be applied as a plug-in module to any multi-encoder incomplete multi-modal segmentation architecture. Code is publicly available at GitHub.

DiagnosticsVol. 16(11)
Imam Mohammad ibn Saud Islamic University (SA), University of Bisha (SA), Sohar University (OM), KTH Royal Institute of Technology (SE)
Quality Education
Openalex Percentile: Top 4%
Advanced Neural Network Applications
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