First Genomic Resource of <i>Agrobacterium radiobacter</i> Associated with Crown Gall Disease in Almond Trees from the West Bank, Palestine

Crown gall disease, typically caused by tumorigenic Agrobacterium species, poses a significant threat to stone fruit crops worldwide. The disease results in compromised plant development and mortality. In the West Bank, almond (Prunus dulcis) represents the leading stone fruit crop. Recent reports have indicated widespread crown gall infections, however, no genomic resources have been available for local pathogenic Agrobacterium strains. Here, we report the first complete genome sequence of Agrobacterium radiobacter strain A23, isolated from gall-infected almond trees in Hebron, West Bank. We obtained a high-quality assembly of 5,551,953 bp comprising one circular chromosome, one linear chromid, and three plasmids. Phylogenetic analysis and overall genomic relatedness indices confirmed strain A23 as Agrobacterium radiobacter. Comprehensive annotation revealed key virulence determinants, including a complete T-DNA region, vir genes, and conjugative transfer machinery (tra and trb) genes located on the tumor-inducing plasmids. This genomic resource provides valuable insights into the pathogenicity mechanisms of crown gall disease in an economically important crop.

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Publication Details

Journal
PhytoFrontiers™
Published
2026-05-22
DOI
https://doi.org/10.1094/phytofr-01-26-0011-a
Primary Topic
Plant tissue culture and regeneration
Type
article
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article

First Genomic Resource of Agrobacterium radiobacter Associated with Crown Gall Disease in Almond Trees from the West Bank, Palestine

Abdalmenem I. M. Hawamda, Jose Luis Valdez-Lopez, Edel Pérez-López, Elisa I. Fantino
PhytoFrontiers™
Plant tissue culture and regeneration
article

First Genomic Resource of Agrobacterium radiobacter Associated with Crown Gall Disease in Almond Trees from the West Bank, Palestine

Abdalmenem I. M. Hawamda, Jose Luis Valdez-Lopez, Edel Pérez-López, Elisa I. Fantino
article en

Abstract

Crown gall disease, typically caused by tumorigenic Agrobacterium species, poses a significant threat to stone fruit crops worldwide. The disease results in compromised plant development and mortality. In the West Bank, almond (Prunus dulcis) represents the leading stone fruit crop. Recent reports have indicated widespread crown gall infections, however, no genomic resources have been available for local pathogenic Agrobacterium strains. Here, we report the first complete genome sequence of Agrobacterium radiobacter strain A23, isolated from gall-infected almond trees in Hebron, West Bank. We obtained a high-quality assembly of 5,551,953 bp comprising one circular chromosome, one linear chromid, and three plasmids. Phylogenetic analysis and overall genomic relatedness indices confirmed strain A23 as Agrobacterium radiobacter. Comprehensive annotation revealed key virulence determinants, including a complete T-DNA region, vir genes, and conjugative transfer machinery (tra and trb) genes located on the tumor-inducing plasmids. This genomic resource provides valuable insights into the pathogenicity mechanisms of crown gall disease in an economically important crop.

PhytoFrontiers™
Palestine Technical University - Kadoorie (PS), Université Laval (CA)
Openalex Percentile: Top 8%
Plant tissue culture and regeneration
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First Genomic Resource of <i>Agrobacterium radiobacter</i> Associated with Crown Gall Disease in Almond Trees from the West Bank, Palestine — Abdalmenem I. M. Hawamda, Jose Luis Valdez-Lopez, et al. · PhytoFrontiers™ (2026) | TGRS Research Map | TGRS