Distinct genomic and immunologic tumor evolution in germline TP53-driven breast cancers
Pathogenic germline TP53 alterations cause Li-Fraumeni Syndrome (LFS), and breast cancer (BC) is the most common cancer in LFS females. Here, we perform a multimodal analysis, comparing LFS-BC with sporadic premenopausal breast cancer which shows that nearly all LFS-BC undergo biallelic loss of TP53, with no recurrent oncogenic variants except ERBB2 (HER2) amplification. Compared to sporadic BC, in situ and invasive LFS-BC exhibit a high burden of short amplified aneuploid segments. Pro-apoptotic p53 target genes BAX and TP53I3 fail to be up-regulated in LFS-BC unlike in sporadic BC compared to normal breast tissue. LFS-BC has lower CD8 + T-cell infiltration compared to sporadic BC yet higher levels of proliferating cytotoxic T-cells. Within LFS-BC, progression from in situ to invasive BC is marked by an increase in chromosomal instability with a decrease in proliferating cytotoxic T-cells. Our study uncovers critical events in mutant p53-driven tumorigenesis in breast tissue.
Authors
- M FELDMAN
- Ashvathi Raghavakaimal (ORCID: https://orcid.org/0000-0002-4386-1164)
- Benjamin D. Greenbaum (ORCID: https://orcid.org/0000-0001-6153-8793)
- Mohana Narasimhamurthy
- Peter Gabriel (ORCID: https://orcid.org/0000-0002-3772-9669)
- Anupma Nayak (ORCID: https://orcid.org/0000-0002-7445-1897)
- Nabamita Boruah (ORCID: https://orcid.org/0009-0006-0631-5275)
- Jinae Park (ORCID: https://orcid.org/0009-0001-7132-290X)
- Renyta Moses (ORCID: https://orcid.org/0000-0003-4708-2958)
- Maliha Tayeb
- Heena Desai (ORCID: https://orcid.org/0000-0002-9710-4468)
- AJ Levine
- A Dinh Le
- K. N. Maxwell
- Gregory Kelly
- Ryan Hausler
- Kurt A. Schalper (ORCID: https://orcid.org/0000-0001-5692-4833)
- Madeline Good (ORCID: https://orcid.org/0009-0002-8078-808X)
- Abigail Doucette
- David Hoyos
- Miguel Lopez de Rodas (ORCID: https://orcid.org/0000-0002-6062-4064)
- Shari B. Goldfarb
Institutions
- Memorial Sloan Kettering Cancer Center (US)
- Cornell University (US)
- Yale University (US)
- Institute for Advanced Study (US)
- Philadelphia VA Medical Center (US)
- University of Pennsylvania (US)
Publication Details
- Journal
- Nature Communications
- Published
- 2026-05-21
- DOI
- https://doi.org/10.1038/s41467-026-73163-4
- Primary Topic
- Cancer-related Molecular Pathways
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Burroughs Wellcome Fund
- National Cancer Institute