Structure-based targeted molecular docking approach towards exploring the bioactive compounds of <i>Lagerstroemia speciosa</i> against black fungus (mucormycosis) and population pharmacokinetic simulation

Conventional treatments for Mucormycosis, a comorbidity in immune-compromised patients affecting the brain or respiratory tract, with medicines like posaconazole, isavuconazole, and amphotericin B possess concerning side effects. Hence, an alternative antifungal biocompound Ethyl 11-bromoundecanoate (EBD) from Lagerstroemia speciosa was investigated using in silico molecular docking against antigenic black fungus epitome. The interaction of EBD with two protein targets, 17 β-1,3-glucanosyltransferase (4WTP) and 1,3-β-glucanase (4M80) in black fungus revealed the docking scores of -4.83 and -6.70, respectively, while the positive control isavuconazole scored -8.49 and -9.94 against the respective proteins. Superior hydrogen bond interactions were demonstrated by EBD, despite lower binding affinity. By pharmacokinetic simulations, 5% oral bioavailability was predicted with a 43.13-hour maximum retention time. Rapid clearance (739.87 ml/min/kg) is caused by EBD’s high lipophilicity, which could be addressed by a hydrophilic delivery system. Better therapeutic efficiency at lower doses was indicated by population kinetics, and higher retention was observed in females compared to males. These findings suggest EBD as an alternative treatment for mucormycosis.

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Publication Details

Journal
Journal of King Saud University - Science
Published
2026-05-21
DOI
https://doi.org/10.25259/jksus_288_2025
Primary Topic
Antifungal resistance and susceptibility
Type
article
Field-Weighted Citation Impact
0.00

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article

Structure-based targeted molecular docking approach towards exploring the bioactive compounds of Lagerstroemia speciosa against black fungus (mucormycosis) and population pharmacokinetic simulation

Hakdong Shin, Yuvaraj Dinakarkumar, Selvaraj Arokiyaraj, S H Kim et al.
Journal of King Saud University - Science
Antifungal resistance and susceptibility
article

Structure-based targeted molecular docking approach towards exploring the bioactive compounds of Lagerstroemia speciosa against black fungus (mucormycosis) and population pharmacokinetic simulation

Hakdong Shin, Yuvaraj Dinakarkumar, Selvaraj Arokiyaraj, S H Kim, Shalini Shivakumar, Nazeer Abdul Azeez
article en

Abstract

Conventional treatments for Mucormycosis, a comorbidity in immune-compromised patients affecting the brain or respiratory tract, with medicines like posaconazole, isavuconazole, and amphotericin B possess concerning side effects. Hence, an alternative antifungal biocompound Ethyl 11-bromoundecanoate (EBD) from Lagerstroemia speciosa was investigated using in silico molecular docking against antigenic black fungus epitome. The interaction of EBD with two protein targets, 17 β-1,3-glucanosyltransferase (4WTP) and 1,3-β-glucanase (4M80) in black fungus revealed the docking scores of -4.83 and -6.70, respectively, while the positive control isavuconazole scored -8.49 and -9.94 against the respective proteins. Superior hydrogen bond interactions were demonstrated by EBD, despite lower binding affinity. By pharmacokinetic simulations, 5% oral bioavailability was predicted with a 43.13-hour maximum retention time. Rapid clearance (739.87 ml/min/kg) is caused by EBD’s high lipophilicity, which could be addressed by a hydrophilic delivery system. Better therapeutic efficiency at lower doses was indicated by population kinetics, and higher retention was observed in females compared to males. These findings suggest EBD as an alternative treatment for mucormycosis.

Journal of King Saud University - ScienceVol. 0
Gachon University (KR), Vel Tech Rangarajan Dr. Sagunthala R&D Institute of Science and Technology (IN), Vels University (IN), SRM Institute of Science and Technology (IN), Kangwon National University (KR), Sejong University (KR)
SRM Institute of Science and Technology, Sejong University, Korea Basic Science Institute, Ministry of Education, India
Openalex Percentile: Top 7%
Antifungal resistance and susceptibility
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