Description of Ornithinimicrobium pulveris sp. nov. and Ornithinimicrobium carbonis sp. nov., isolated from a coal mine working environment

Four actinobacterial strains, Y1847ᵀ, Y1694, W1665ᵀ and W1679, were isolated from the coal mine working environment in Shanxi Province, China. Sequence comparison of 16S rRNA genes indicated that the strains were closely related to Ornithinimicrobium kibberense K22-20ᵀ, with similarities ranging from 98.06 to 98.47%. Further phylogenetic analyses (based on 16S rRNA gene and core-genome) placed the strains within the genus Ornithinimicrobium and formed two distinct clades. The strains are Gram-stain-positive, facultative anaerobes and non-motile. Specifically, strain Y1847ᵀ is coccoid, whereas strain W1665ᵀ is rod-shaped. Their cell-wall peptidoglycan contains ornithine but lacks serine, with menaquinone MK-8(H 4 ) as the predominant respiratory quinone and diphosphatidylglycerol and phosphatidylglycerol as the major polar lipids. The strains differed in their major fatty acid profiles: Y1847ᵀ and Y1694 contained iso-C 15:0 , iso-C 16:0 and summed feature 9 (comprising 10-methyl C 16:0 and/or iso-C 17:1 ω 9 c ), whereas W1665ᵀ and W1679 contained iso-C 15:0 , iso-C 17:0 and summed feature 9. Based on phylogenetic, phenotypic and chemotaxonomic analyses, strains Y1847ᵀ/Y1694 and W1665ᵀ/W1679 represent two novel species within the genus Ornithinimicrobium , for which the names Ornithinimicrobium pulveris sp. nov. (type strain Y1847ᵀ=KCTC 59532ᵀ=GDMCC 1.5550ᵀ) and Ornithinimicrobium carbonis sp. nov. (type strain W1665ᵀ=KCTC 59593ᵀ=GDMCC 1.5709ᵀ) are proposed.

Authors

Institutions

Publication Details

Journal
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2026-05-21
DOI
https://doi.org/10.1099/ijsem.0.007163
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Description of Ornithinimicrobium pulveris sp. nov. and Ornithinimicrobium carbonis sp. nov., isolated from a coal mine working environment

Caixin Yang, Zhiming Kang, T F Liu, M Y Zhang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Description of Ornithinimicrobium pulveris sp. nov. and Ornithinimicrobium carbonis sp. nov., isolated from a coal mine working environment

Caixin Yang, Zhiming Kang, T F Liu, M Y Zhang, Taoyu Yan, Qiang Yang, Ji Pu, Junyao Xie, Zixin Weng, H Zheng, Lijun Zhao, Jinyan Deng, Xiaojuan Du, Jianguo Xu, Kui Dong, Yaojun Sun, Fangyu Gao
article en

Abstract

Four actinobacterial strains, Y1847ᵀ, Y1694, W1665ᵀ and W1679, were isolated from the coal mine working environment in Shanxi Province, China. Sequence comparison of 16S rRNA genes indicated that the strains were closely related to Ornithinimicrobium kibberense K22-20ᵀ, with similarities ranging from 98.06 to 98.47%. Further phylogenetic analyses (based on 16S rRNA gene and core-genome) placed the strains within the genus Ornithinimicrobium and formed two distinct clades. The strains are Gram-stain-positive, facultative anaerobes and non-motile. Specifically, strain Y1847ᵀ is coccoid, whereas strain W1665ᵀ is rod-shaped. Their cell-wall peptidoglycan contains ornithine but lacks serine, with menaquinone MK-8(H 4 ) as the predominant respiratory quinone and diphosphatidylglycerol and phosphatidylglycerol as the major polar lipids. The strains differed in their major fatty acid profiles: Y1847ᵀ and Y1694 contained iso-C 15:0 , iso-C 16:0 and summed feature 9 (comprising 10-methyl C 16:0 and/or iso-C 17:1 ω 9 c ), whereas W1665ᵀ and W1679 contained iso-C 15:0 , iso-C 17:0 and summed feature 9. Based on phylogenetic, phenotypic and chemotaxonomic analyses, strains Y1847ᵀ/Y1694 and W1665ᵀ/W1679 represent two novel species within the genus Ornithinimicrobium , for which the names Ornithinimicrobium pulveris sp. nov. (type strain Y1847ᵀ=KCTC 59532ᵀ=GDMCC 1.5550ᵀ) and Ornithinimicrobium carbonis sp. nov. (type strain W1665ᵀ=KCTC 59593ᵀ=GDMCC 1.5709ᵀ) are proposed.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 76(5)
Shanxi Medical University (CN), Shanxi University (CN), Shanxi Eye Hospital (CN), National Institute for Communicable Disease Control and Prevention (CN)
Health Commission of Shanxi Province
Openalex Percentile: Top 9%
Genomics and Phylogenetic Studies
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.