Interpretable Non-Separable Spatio-Temporal Interaction Cox Model for Diffusion Prediction in Invasive Species Management

Accurate prediction of invasive species diffusion is essential for effective management and ecological conservation. Existing spatio-temporal Cox process models face limitations due to the separability assumption, which fails to capture spatio-temporal coupling dynamics inherent in biological diffusion processes. This study proposes a Spatio-Temporal Interaction Kernel Cox (STIK-Cox) model that constructs a non-separable conditional intensity function integrating baseline intensity, spatial and temporal proximity kernels, seasonal fluctuation, and a spatio-temporal interaction term. The model employs maximum likelihood estimation with Limited-memory Broyden–Fletcher–Goldfarb–Shanno with Bounds (L-BFGS-B) optimisation and incorporates SHapley Additive exPlanations (SHAP) for interpretability analysis. Using the Vespa mandarinia (Hymenoptera, Vespidae) monitoring dataset from Washington State, the model achieves a comprehensive accuracy score of 0.957, a capture rate of 98.74% at a 0.5° threshold, and a mean prediction error of 0.0802°. K-function analysis confirms effective capture of spatial clustering patterns, while SHAP analysis reveals longitude as the primary predictive driver. The non-separable design outperforms conventional methods including inverse distance weighting and Poisson point processes. This framework demonstrates the potential of non-separable spatio-temporal point processes for invasive species early warning, providing a scientific basis for targeted monitoring and resource allocation in ecological management.

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Publication Details

Journal
Algorithms
Published
2026-05-19
DOI
https://doi.org/10.3390/a19050408
Primary Topic
Species Distribution and Climate Change
Type
article
Field-Weighted Citation Impact
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article

Interpretable Non-Separable Spatio-Temporal Interaction Cox Model for Diffusion Prediction in Invasive Species Management

Algorithms
Species Distribution and Climate Change
article

Interpretable Non-Separable Spatio-Temporal Interaction Cox Model for Diffusion Prediction in Invasive Species Management

article en

Abstract

Accurate prediction of invasive species diffusion is essential for effective management and ecological conservation. Existing spatio-temporal Cox process models face limitations due to the separability assumption, which fails to capture spatio-temporal coupling dynamics inherent in biological diffusion processes. This study proposes a Spatio-Temporal Interaction Kernel Cox (STIK-Cox) model that constructs a non-separable conditional intensity function integrating baseline intensity, spatial and temporal proximity kernels, seasonal fluctuation, and a spatio-temporal interaction term. The model employs maximum likelihood estimation with Limited-memory Broyden–Fletcher–Goldfarb–Shanno with Bounds (L-BFGS-B) optimisation and incorporates SHapley Additive exPlanations (SHAP) for interpretability analysis. Using the Vespa mandarinia (Hymenoptera, Vespidae) monitoring dataset from Washington State, the model achieves a comprehensive accuracy score of 0.957, a capture rate of 98.74% at a 0.5° threshold, and a mean prediction error of 0.0802°. K-function analysis confirms effective capture of spatial clustering patterns, while SHAP analysis reveals longitude as the primary predictive driver. The non-separable design outperforms conventional methods including inverse distance weighting and Poisson point processes. This framework demonstrates the potential of non-separable spatio-temporal point processes for invasive species early warning, providing a scientific basis for targeted monitoring and resource allocation in ecological management.

AlgorithmsVol. 19(5)
Wannan Medical College (CN), Anhui Medical University (CN), University of Cambridge (GB), MRC Biostatistics Unit (GB)
Life in Land
Openalex Percentile: Top 6%
Species Distribution and Climate Change
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