An edge β‐strand mutation turns ubiquitin into a pore‐forming amyloid

Ubiquitin (Ub) is a highly conserved eukaryotic protein, generally regarded as stable and soluble under physiological conditions, playing a key role in maintaining cellular protein balance. Using complementary bioinformatic, biophysical, immunochemical, and electrophysiological approaches, we show that a single point mutation-the substitution of Glu16 with Val (E16V) in an edge β-strand-dramatically alters Ub behavior, inducing amyloid-like aggregation, membrane permeabilization, and cytotoxicity. Remarkably, E16V retains the native globular fold of wild-type Ub in aqueous solution, yet undergoes a functional switch upon interaction with anionic membranes. E16V assembles into prefibrillar oligomers, forms voltage-dependent ion channels with well-defined conductance states and lifetimes, and disrupts membrane integrity in both bacterial and mammalian cells. In contrast, wild-type Ub remains monomeric and inert under identical conditions. Synthetic peptides encompassing the mutated β-strand reproduce the cytotoxic effects, supporting a localized, sequence-specific mechanism of action reminiscent of amyloidogenic motifs found in yeast adhesins. These findings uncover a hidden amyloidogenic potential in Ub and establish the E16V mutant as a unique model for membrane-triggered amyloid pore formation and the rational design of membrane-active antimicrobial peptides.

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Journal
Protein Science
Published
2026-05-17
DOI
https://doi.org/10.1002/pro.70603
Primary Topic
Antimicrobial Peptides and Activities
Type
article
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article

An edge β‐strand mutation turns ubiquitin into a pore‐forming amyloid

Vincenza Calò, Fabio Arnesano, Maurizio Losacco, Vincenzo Mangini et al.
Protein Science
Antimicrobial Peptides and Activities
article

An edge β‐strand mutation turns ubiquitin into a pore‐forming amyloid

Vincenza Calò, Fabio Arnesano, Maurizio Losacco, Vincenzo Mangini, Rosanna Mallamaci, Daniela Meleleo
article en

Abstract

Ubiquitin (Ub) is a highly conserved eukaryotic protein, generally regarded as stable and soluble under physiological conditions, playing a key role in maintaining cellular protein balance. Using complementary bioinformatic, biophysical, immunochemical, and electrophysiological approaches, we show that a single point mutation-the substitution of Glu16 with Val (E16V) in an edge β-strand-dramatically alters Ub behavior, inducing amyloid-like aggregation, membrane permeabilization, and cytotoxicity. Remarkably, E16V retains the native globular fold of wild-type Ub in aqueous solution, yet undergoes a functional switch upon interaction with anionic membranes. E16V assembles into prefibrillar oligomers, forms voltage-dependent ion channels with well-defined conductance states and lifetimes, and disrupts membrane integrity in both bacterial and mammalian cells. In contrast, wild-type Ub remains monomeric and inert under identical conditions. Synthetic peptides encompassing the mutated β-strand reproduce the cytotoxic effects, supporting a localized, sequence-specific mechanism of action reminiscent of amyloidogenic motifs found in yeast adhesins. These findings uncover a hidden amyloidogenic potential in Ub and establish the E16V mutant as a unique model for membrane-triggered amyloid pore formation and the rational design of membrane-active antimicrobial peptides.

Protein ScienceVol. 35(6)
University of Foggia (IT), Institute of Crystallography (IT), University of Bari Aldo Moro (IT)
Openalex Percentile: Top 7%
Antimicrobial Peptides and Activities
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An edge β‐strand mutation turns ubiquitin into a pore‐forming amyloid — Vincenza Calò, Fabio Arnesano, et al. · Protein Science (2026) | TGRS Research Map | TGRS