Circulation of Influenza and Other Respiratory Viruses in Tunisia, 2022–2023 Season

INTRODUCTION: Influenza sentinel surveillance has been ongoing in Tunisia since 1999. We describe the epidemiology of respiratory viruses during 2022-2023, the first season to include testing for other respiratory viruses, such as respiratory syncytial virus (RSV). METHODS: We analyzed weekly surveillance data from severe acute respiratory infection (SARI) inpatients and influenza-like illness outpatients from 11 hospitals and 85 clinics in Tunisia. Nasopharyngeal specimens and demographic, clinical, and vaccination data were collected. Specimens were tested by rRT-PCR for influenza, SARS-CoV-2, RSV, and 18 other respiratory viruses. Descriptive statistics were used to summarize case characteristics; group differences were assessed using chi-squared or Fisher's exact tests. RESULTS: 2038 specimens were collected from unique patients; 1231 (60.4%) were positive for ≥ 1 respiratory virus and 200 (16.2%) were positive for ≥ 2 viruses. Influenza was the most detected (n = 445; 21.8%), followed by rhinovirus (n = 301, 14.8%), RSV (n = 255, 12.5%), and SARS-CoV-2 (n = 125, 6.1%). Among SARI cases, infections with influenza and SARS-CoV-2 were more common in adults ≥ 50 years (61.8% and 71.4%, respectively), while children < 2 years had higher RSV prevalence (83.0%, adjusted p-value = 0.004). 4.9% of patients received a recent influenza vaccine. CONCLUSION: The burden of respiratory viruses varied by age, with RSV being more prevalent among younger children and SARS-CoV-2 and influenza being more prevalent among older adults. Ongoing sentinel surveillance is essential to monitor priority respiratory pathogens, particularly those with available public health interventions, such as vaccination, to enable timely action and reduce disease burden.

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Journal
Influenza and Other Respiratory Viruses
Published
2026-05-01
DOI
https://doi.org/10.1111/irv.70199
Primary Topic
Respiratory viral infections research
Type
article
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article

Circulation of Influenza and Other Respiratory Viruses in Tunisia, 2022–2023 Season

Ennouri Emna, Ben Hamida Chokri, Bougharriou Ichrak, Ben Salah Afif et al.
Influenza and Other Respiratory Viruses
Respiratory viral infections research
article

Circulation of Influenza and Other Respiratory Viruses in Tunisia, 2022–2023 Season

Ennouri Emna, Ben Hamida Chokri, Bougharriou Ichrak, Ben Salah Afif, Ben Jemaa Mounir, Laouini Dhafer, El Ghord Hakim, Miraoui Amal, Ben Slimen Najla, Yazidi Rihab, Bouabid Leila, Ben Khelil Jalila, Menif Khaled, Bouslah Zoubeir, Toumi Radhouane, Boutiba‐. Ben Boubaker Ilhem, Guebsi Nour El Houda, Bouguerra Hind, Ben Alaya Nissaf, Zureick Kinda, Whitehouse Erin Rachel, Dhaouadi Sonia, Ben Mrad Nacef, Boussarsar Mohamed, Abid Salma, Merhabane Takoua
article en

Abstract

INTRODUCTION: Influenza sentinel surveillance has been ongoing in Tunisia since 1999. We describe the epidemiology of respiratory viruses during 2022-2023, the first season to include testing for other respiratory viruses, such as respiratory syncytial virus (RSV). METHODS: We analyzed weekly surveillance data from severe acute respiratory infection (SARI) inpatients and influenza-like illness outpatients from 11 hospitals and 85 clinics in Tunisia. Nasopharyngeal specimens and demographic, clinical, and vaccination data were collected. Specimens were tested by rRT-PCR for influenza, SARS-CoV-2, RSV, and 18 other respiratory viruses. Descriptive statistics were used to summarize case characteristics; group differences were assessed using chi-squared or Fisher's exact tests. RESULTS: 2038 specimens were collected from unique patients; 1231 (60.4%) were positive for ≥ 1 respiratory virus and 200 (16.2%) were positive for ≥ 2 viruses. Influenza was the most detected (n = 445; 21.8%), followed by rhinovirus (n = 301, 14.8%), RSV (n = 255, 12.5%), and SARS-CoV-2 (n = 125, 6.1%). Among SARI cases, infections with influenza and SARS-CoV-2 were more common in adults ≥ 50 years (61.8% and 71.4%, respectively), while children < 2 years had higher RSV prevalence (83.0%, adjusted p-value = 0.004). 4.9% of patients received a recent influenza vaccine. CONCLUSION: The burden of respiratory viruses varied by age, with RSV being more prevalent among younger children and SARS-CoV-2 and influenza being more prevalent among older adults. Ongoing sentinel surveillance is essential to monitor priority respiratory pathogens, particularly those with available public health interventions, such as vaccination, to enable timely action and reduce disease burden.

Influenza and Other Respiratory VirusesVol. 20(5)
Tunis University (TN), Centers for Disease Control and Prevention (US), University of Sfax (TN), Hôpital Farhat Hached (TN), Hôpital régional (CH), Hopital Universitaire Hedi Chaker (TN), Hôpital Charles-Nicolle (TN), The Centers (US), National Observatory (BR), Institut Pasteur de Tunis (TN), Ministry of Agriculture (TN), Children's Hospital (TN), Hopital Universitaire Habib Bourguiba (TN), Abderrahmane Mami Hospital (TN), Arabian Gulf University (BH), Tunis El Manar University (TN), University of Sousse (TN)
Good health and well-being
Openalex Percentile: Top 4%
Respiratory viral infections research
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