Recrystallization-Induced Tautomerism and Selective Imine Formation of <i>N</i> -Diphenylmethylene-Serine Methyl Ester

Abstract Diphenylmethylene serine methyl ester is an important precursor for the synthesis of O-glycoprotein mimics; however, it exists as an equilibrium mixture of imine and oxazolidine forms due to intramolecular cyclization. Upon crystallization from ether/hexane, the oxazolidine form is typically obtained as the predominant species, and the pure imine form has not been isolated to date. In this study, diphenylmethylene serine methyl ester was synthesized from serine methyl ester and benzophenone imine, purified by chromatography, and subsequently recrystallized from methanol to selectively afford the imine form in high purity. The structure was confirmed by nuclear magnetic resonance spectroscopy and single-crystal X-ray diffraction analysis. Tautomeric interconversion was investigated in deuterated chloroform at various temperatures, revealing a gradual conversion of the imine into the oxazolidine form until equilibrium was established. These findings clarify the tautomeric behavior of this compound and provide an effective strategy for the selective isolation of tautomers of serine derivatives.

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Publication Details

Journal
Bioscience Biotechnology and Biochemistry
Published
2026-05-09
DOI
https://doi.org/10.1093/bbb/zbag068
Primary Topic
Chemical Synthesis and Analysis
Type
article
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article

Recrystallization-Induced Tautomerism and Selective Imine Formation of N -Diphenylmethylene-Serine Methyl Ester

Zetryana Puteri Tachrim, Yuki Fukuda, Tsunayoshi Takehara, Yuta Murai et al.
Bioscience Biotechnology and Biochemistry
Chemical Synthesis and Analysis
article

Recrystallization-Induced Tautomerism and Selective Imine Formation of N -Diphenylmethylene-Serine Methyl Ester

Zetryana Puteri Tachrim, Yuki Fukuda, Tsunayoshi Takehara, Yuta Murai, Takeyuki Suzuki, Fumiya Nakayama, Desita Triana Aziz, Sumayya Binti Abd Azis, Marwah Wirda Ningsih, Resky Nugraha, Makoto Hashimoto
article en

Abstract

Abstract Diphenylmethylene serine methyl ester is an important precursor for the synthesis of O-glycoprotein mimics; however, it exists as an equilibrium mixture of imine and oxazolidine forms due to intramolecular cyclization. Upon crystallization from ether/hexane, the oxazolidine form is typically obtained as the predominant species, and the pure imine form has not been isolated to date. In this study, diphenylmethylene serine methyl ester was synthesized from serine methyl ester and benzophenone imine, purified by chromatography, and subsequently recrystallized from methanol to selectively afford the imine form in high purity. The structure was confirmed by nuclear magnetic resonance spectroscopy and single-crystal X-ray diffraction analysis. Tautomeric interconversion was investigated in deuterated chloroform at various temperatures, revealing a gradual conversion of the imine into the oxazolidine form until equilibrium was established. These findings clarify the tautomeric behavior of this compound and provide an effective strategy for the selective isolation of tautomers of serine derivatives.

Bioscience Biotechnology and Biochemistry
Hokkaido University (JP), Osaka Research Institute of Industrial Science and Technology (JP), National Institute of Science and Technology (ID)
Openalex Percentile: Top 8%
Chemical Synthesis and Analysis
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Recrystallization-Induced Tautomerism and Selective Imine Formation of <i>N</i> -Diphenylmethylene-Serine Methyl Ester — Zetryana Puteri Tachrim, Yuki Fukuda, et al. · Bioscience Biotechnology and Biochemistry (2026) | TGRS Research Map | TGRS