sc-ChromAging: A Single-Cell Chromatin Accessibility-based Clock Decodes Cell-Type-Specific Epigenetic Aging Trajectories

sc-ChromAging, a chromatin accessibility-based aging clock, was developed using single-cell ATAC-seq from 401 Chinese individuals. It identified CD4⁺ naive T cells as the most accurate predictors of age. This clock linked immune aging with pathways in inflammation, infection, and tumor susceptibility, and connecting chromatin changes to plasma metabolites like triacylglycerols.

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Publication Details

Journal
npj Aging
Published
2026-05-09
DOI
https://doi.org/10.1038/s41514-026-00398-2
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
0.00

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article

sc-ChromAging: A Single-Cell Chromatin Accessibility-based Clock Decodes Cell-Type-Specific Epigenetic Aging Trajectories

Junyu Shi, Xindi Wei, Hongchang Lai, Youcheng Dong
npj Aging
Single-cell and spatial transcriptomics
article

sc-ChromAging: A Single-Cell Chromatin Accessibility-based Clock Decodes Cell-Type-Specific Epigenetic Aging Trajectories

Junyu Shi, Xindi Wei, Hongchang Lai, Youcheng Dong
article en

Abstract

sc-ChromAging, a chromatin accessibility-based aging clock, was developed using single-cell ATAC-seq from 401 Chinese individuals. It identified CD4⁺ naive T cells as the most accurate predictors of age. This clock linked immune aging with pathways in inflammation, infection, and tumor susceptibility, and connecting chromatin changes to plasma metabolites like triacylglycerols.

npj Aging
Shanghai Ninth People's Hospital (CN)
National Natural Science Foundation of China
Good health and well-being
Openalex Percentile: Top 8%
Single-cell and spatial transcriptomics
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