Mechanistic Microbial Death Pathways Improve Regional Soil Carbon Simulations across Diverse Cropland Ecosystems

Microbial death pathways (MDPs) are increasingly recognized as key drivers of terrestrial carbon cycling, primarily through their regulation of microbial necromass carbon (MNC), a critical pool in global carbon dynamics. Yet explicit representation of MDPs in soil organic carbon (SOC) models remains limited. Here, we developed and evaluated three SOC models that differ in their structure of MNC pool: the multiple-pathway necromass (MPN) model, which partitions microbial necromass carbon (MNC) into four MDP-derived subpools; the dual necromass (DUN) model, which differentiates two necromass pools with distinct decay rates; and the single necromass (SIN) model, which aggregates necromass into a single pool. Using a unified data assimilation framework and SOC observations from six major agricultural regions in China, we found that the MPN model consistently outperformed DUN and SIN models across most regions, producing necromass subpool dynamics, scenario responses, and parameter sensitivities that closely reflect the mechanistic understanding of MDPs. In cold or nutrient-limited regions, however, the simpler DUN model performed similarly while requiring fewer parameters, emphasizing the importance of balancing model complexity with regional ecological constraints. Our results demonstrate that explicitly incorporating MDPs enhances the robustness and mechanistic realism of SOC simulations and provides a robust foundation for more explicit representations of MDPs to assess the soil carbon sequestration potential and guide sustainable land management.

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Publication Details

Journal
Environmental Science & Technology
Published
2026-05-08
DOI
https://doi.org/10.1021/acs.est.5c16652
Primary Topic
Soil Carbon and Nitrogen Dynamics
Type
article
Field-Weighted Citation Impact
0.00

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article

Mechanistic Microbial Death Pathways Improve Regional Soil Carbon Simulations across Diverse Cropland Ecosystems

Mohamed Abbas, Yuwan Li, Gangsheng Wang, Neil McLaughlin et al.
Environmental Science & Technology
Soil Carbon and Nitrogen Dynamics
article

Mechanistic Microbial Death Pathways Improve Regional Soil Carbon Simulations across Diverse Cropland Ecosystems

Mohamed Abbas, Yuwan Li, Gangsheng Wang, Neil McLaughlin, Wenjun Wang, Aizhen Liang, Yan Zhang, Zhongjun Jia, Xuewen Chen
article en

Abstract

Microbial death pathways (MDPs) are increasingly recognized as key drivers of terrestrial carbon cycling, primarily through their regulation of microbial necromass carbon (MNC), a critical pool in global carbon dynamics. Yet explicit representation of MDPs in soil organic carbon (SOC) models remains limited. Here, we developed and evaluated three SOC models that differ in their structure of MNC pool: the multiple-pathway necromass (MPN) model, which partitions microbial necromass carbon (MNC) into four MDP-derived subpools; the dual necromass (DUN) model, which differentiates two necromass pools with distinct decay rates; and the single necromass (SIN) model, which aggregates necromass into a single pool. Using a unified data assimilation framework and SOC observations from six major agricultural regions in China, we found that the MPN model consistently outperformed DUN and SIN models across most regions, producing necromass subpool dynamics, scenario responses, and parameter sensitivities that closely reflect the mechanistic understanding of MDPs. In cold or nutrient-limited regions, however, the simpler DUN model performed similarly while requiring fewer parameters, emphasizing the importance of balancing model complexity with regional ecological constraints. Our results demonstrate that explicitly incorporating MDPs enhances the robustness and mechanistic realism of SOC simulations and provides a robust foundation for more explicit representations of MDPs to assess the soil carbon sequestration potential and guide sustainable land management.

Environmental Science & Technology
International Development Research Centre (CA), Agriculture and Agri-Food Canada (CA), Cairo University (EG), Chinese Academy of Sciences (CN), Wuhan University (CN), Northeast Institute of Geography and Agroecology (CN), Carbon180 (US), Arab and African Research Center (EG), University of Chinese Academy of Sciences (CN), Ottawa Research and Development Centre
National Natural Science Foundation of China, Chinese Academy of Sciences, National Key Research and Development Program of China
Zero hunger
Openalex Percentile: Top 8%
Soil Carbon and Nitrogen Dynamics
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