Prevalence and Distribution of Beta-Lactamase Genes in Enterobacteriaceae across One Health Interface in Sub-Saharan Africa: A Systematic Review and Meta-Analysis

: Antimicrobial resistance (AMR) in Sub-Saharan Africa (SSA) represents a major public health crisis, with beta-lactamase-producing Enterobacteriaceae at its core. Despite several regional studies, a comprehensive One Health–focused synthesis of beta-lactamase gene prevalence across human, animal, and environmental reservoirs in SSA has been lacking. : We conducted a PRISMA-guided systematic review and meta-analysis of studies from 2005 onward across PubMed, ScienceDirect, Google Scholar, and African Journals Online. Study quality was assessed using the Joanna Briggs Institute (JBI) Critical Appraisal Checklist for prevalence studies. Pooled prevalence was calculated using random-effects meta-analysis with logit transformation. Publication bias was assessed using funnel plots and Egger’s regression test, and sensitivity analyses were conducted. Of 2,045 identified records, 93 were eligible for meta-analysis, representing studies from 16 SSA countries. : The pooled prevalence of ESBL genes, based strictly on genotypic (molecular) detection, was 26% (95% CI: 20–34%) in human isolates, 31% (95% CI: 20–45%) in animal isolates, and 22% (95% CI: 17–29%) in environmental isolates (all I² >89%). AmpC prevalence ranged from approximately 18% to 30% across sources, while carbapenemase prevalence reached 35% (95% CI: 24–47%) in animal isolates compared to 11% in humans and the environment. The ESBL gene bla CTX-M-15 dominated, present in 61% of human, 85% of animal, and 37% of environmental samples. Co-occurrence of multiple resistance genes was frequently observed. : These findings highlight widespread beta-lactamase-producing Enterobacteriaceae across SSA, with critically high levels of bla CTX-M-15 and notable carbapenemase prevalence in animals, though the limited number of animal-source studies warrants cautious interpretation. Comprehensive One Health interventions, including integrated surveillance, antimicrobial stewardship, and investment in laboratory capacity, are urgently needed.

Authors

Institutions

Publication Details

Journal
Scientific African
Published
2026-05-01
DOI
https://doi.org/10.1016/j.sciaf.2026.e03387
Primary Topic
Antibiotic Resistance in Bacteria
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Prevalence and Distribution of Beta-Lactamase Genes in Enterobacteriaceae across One Health Interface in Sub-Saharan Africa: A Systematic Review and Meta-Analysis

Fiyinfoluwa Demilade Ojeniyi, Olugbenga Adekunle Olowe, Kaisar Rahman, Oluyinka Oladele Opaleye et al.
Scientific African
Antibiotic Resistance in Bacteria
article

Prevalence and Distribution of Beta-Lactamase Genes in Enterobacteriaceae across One Health Interface in Sub-Saharan Africa: A Systematic Review and Meta-Analysis

Fiyinfoluwa Demilade Ojeniyi, Olugbenga Adekunle Olowe, Kaisar Rahman, Oluyinka Oladele Opaleye, Olusola Ojurongbe, Babafela Awosile, Olusolabomi Adefioye
article en

Abstract

: Antimicrobial resistance (AMR) in Sub-Saharan Africa (SSA) represents a major public health crisis, with beta-lactamase-producing Enterobacteriaceae at its core. Despite several regional studies, a comprehensive One Health–focused synthesis of beta-lactamase gene prevalence across human, animal, and environmental reservoirs in SSA has been lacking. : We conducted a PRISMA-guided systematic review and meta-analysis of studies from 2005 onward across PubMed, ScienceDirect, Google Scholar, and African Journals Online. Study quality was assessed using the Joanna Briggs Institute (JBI) Critical Appraisal Checklist for prevalence studies. Pooled prevalence was calculated using random-effects meta-analysis with logit transformation. Publication bias was assessed using funnel plots and Egger’s regression test, and sensitivity analyses were conducted. Of 2,045 identified records, 93 were eligible for meta-analysis, representing studies from 16 SSA countries. : The pooled prevalence of ESBL genes, based strictly on genotypic (molecular) detection, was 26% (95% CI: 20–34%) in human isolates, 31% (95% CI: 20–45%) in animal isolates, and 22% (95% CI: 17–29%) in environmental isolates (all I² >89%). AmpC prevalence ranged from approximately 18% to 30% across sources, while carbapenemase prevalence reached 35% (95% CI: 24–47%) in animal isolates compared to 11% in humans and the environment. The ESBL gene bla CTX-M-15 dominated, present in 61% of human, 85% of animal, and 37% of environmental samples. Co-occurrence of multiple resistance genes was frequently observed. : These findings highlight widespread beta-lactamase-producing Enterobacteriaceae across SSA, with critically high levels of bla CTX-M-15 and notable carbapenemase prevalence in animals, though the limited number of animal-source studies warrants cautious interpretation. Comprehensive One Health interventions, including integrated surveillance, antimicrobial stewardship, and investment in laboratory capacity, are urgently needed.

Scientific African
Texas Tech University (US), Department of Biological Sciences (RU), Ladoke Akintola University of Technology (NG), Texas Tech University Health Sciences Center (US), Amarillo College (US)
Openalex Percentile: Top 10%
Antibiotic Resistance in Bacteria
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.