Hyperspectral Imaging-Based Evaluation of Seasonal Growth Characteristics in Turfgrass

Efficient phenotyping is essential for accelerating genetic improvement in turfgrass breeding, where manual measurements are labor-intensive. This study evaluated hyperspectral imaging (HSI) as a high-throughput tool for assessing Zoysia spp. breeding populations consisting of 464 genotypes. HSI data (400–1000 nm) were processed through a user-in-the-loop hybrid segmentation pipeline integrating UMAP dimensionality reduction, DBSCAN clustering, Random Forest classification, and pseudo-RGB refinement. To independently assess vegetation classification performance, 10,000 manually annotated reference points from 50 pseudo-RGB images were compared with the automated module, yielding an overall accuracy of 0.9697, a precision of 0.8830, a recall of 0.9240, a specificity of 0.9779, an F1-score of 0.9030, and Cohen’s kappa of 0.8851. A Combined Ranking Score (CRS) integrating five vegetation indices and vegetation pixel count was significantly associated with aerial shoot count (r = −0.445, p < 0.001) and runner count (r = −0.207, p < 0.001). The highest-ranked genotype showed a 9370.3-pixel increase in vegetation area between 6 and 16 weeks after transplanting, compared with 1417.7 pixels for the lowest-ranked genotype. Classification performance declined under high-coverage conditions, indicating increased mixed-pixel ambiguity in dense canopies. These results suggest that HSI-based CRS can support rapid, objective, and non-destructive relative ranking of density-related vegetative growth in turfgrass breeding. Because the study was conducted at a single location and season and correlations with manual traits were moderate, the framework is best interpreted as a screening and ranking tool rather than a direct predictive model.

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Publication Details

Journal
Plants
Published
2026-05-01
DOI
https://doi.org/10.3390/plants15091393
Primary Topic
Turfgrass Adaptation and Management
Type
article
Field-Weighted Citation Impact
0.00

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article

Hyperspectral Imaging-Based Evaluation of Seasonal Growth Characteristics in Turfgrass

Eun Seol Jeong, Donghwan Shim, Jae Gyeong Jung, Jun Hyuck Yoon et al.
Plants
Turfgrass Adaptation and Management
article

Hyperspectral Imaging-Based Evaluation of Seasonal Growth Characteristics in Turfgrass

Eun Seol Jeong, Donghwan Shim, Jae Gyeong Jung, Jun Hyuck Yoon, Jae Yeob Jeong, Eun Ji Bae
article en

Abstract

Efficient phenotyping is essential for accelerating genetic improvement in turfgrass breeding, where manual measurements are labor-intensive. This study evaluated hyperspectral imaging (HSI) as a high-throughput tool for assessing Zoysia spp. breeding populations consisting of 464 genotypes. HSI data (400–1000 nm) were processed through a user-in-the-loop hybrid segmentation pipeline integrating UMAP dimensionality reduction, DBSCAN clustering, Random Forest classification, and pseudo-RGB refinement. To independently assess vegetation classification performance, 10,000 manually annotated reference points from 50 pseudo-RGB images were compared with the automated module, yielding an overall accuracy of 0.9697, a precision of 0.8830, a recall of 0.9240, a specificity of 0.9779, an F1-score of 0.9030, and Cohen’s kappa of 0.8851. A Combined Ranking Score (CRS) integrating five vegetation indices and vegetation pixel count was significantly associated with aerial shoot count (r = −0.445, p < 0.001) and runner count (r = −0.207, p < 0.001). The highest-ranked genotype showed a 9370.3-pixel increase in vegetation area between 6 and 16 weeks after transplanting, compared with 1417.7 pixels for the lowest-ranked genotype. Classification performance declined under high-coverage conditions, indicating increased mixed-pixel ambiguity in dense canopies. These results suggest that HSI-based CRS can support rapid, objective, and non-destructive relative ranking of density-related vegetative growth in turfgrass breeding. Because the study was conducted at a single location and season and correlations with manual traits were moderate, the framework is best interpreted as a screening and ranking tool rather than a direct predictive model.

PlantsVol. 15(9)
Chungnam National University (KR), Korea Forest Service (KR)
National Institute of Forest Science
Openalex Percentile: Top 9%
Turfgrass Adaptation and Management
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