ARTIFICIAL INTELLIGENCE–ASSISTED DRUG DESIGN IN HETEROCYCLIC CHEMISTRY: A FRAGMENT BASED MACHINE LEARNING REVIEW
Heterocyclic compounds form the backbone of a majority of clinically approved smallmolecule drugs due to their structural diversity, favorable physicochemical properties, and wide spectrum of biological activities. Despite their importance, conventional heterocyclic drug discovery remains a time-consuming and resourceintensive process, relying heavily on trial-and-error synthesis and extensive biological screening. In recent years, artificial intelligence (AI), particularly machine learning (ML), has emerged as a transformative approach in drug discovery, enabling rapid prediction of biological activity, toxicity, and pharmacokinetic behavior. This review critically examines the role of AI-assisted and fragment-based machine learning strategies in heterocyclic drug design. Special emphasis is placed on heterocycle-aware fragment representations, structure–activity relationship modeling, attention-based learning, and model interpretability. Current challenges, limitations, and future prospects of AI-driven heterocyclic medicinal chemistry are also discussed, highlighting the potential of these approaches to accelerate rational drug design and reduce attrition rates.
Authors
- Anchal Sharma* Isha Sharma
Publication Details
- Journal
- Zenodo (CERN European Organization for Nuclear Research)
- Published
- 2026-05-01
- DOI
- https://doi.org/10.5281/zenodo.20023817
- Primary Topic
- Computational Drug Discovery Methods
- Type
- article
- Field-Weighted Citation Impact
- 0.00