Time-resolved aortic 3D shape reconstruction from a limited number of cine 2D MRI slices

BACKGROUND AND OBJECTIVE: To assess the feasibility and accuracy of reconstructing time-resolved, three-dimensional, subject-specific aortic geometries from a limited number of standard cine 2D magnetic resonance imaging (MRI) acquisitions. This is achieved by coupling a statistical shape model with a differentiable volumetric mesh optimization algorithm. METHODS: Cine 2D MRI slices were manually segmented and used to reconstruct subject-specific aortic geometries via a differentiable mesh optimization algorithm, constrained by a statistical shape model. Optimal slice positioning was first evaluated on synthetic data, followed by in-vivo acquisition in 30 subjects (19 volunteers and 11 aortic stenosis patients). Time-resolved aortic geometries were reconstructed, from which geometric descriptors and radial strain were derived. In a subset of 10 subjects, 4D flow MRI data was acquired to provide volumetric reference for peak-systolic shape comparison. RESULTS: for the young, mid-age, and elderly groups, respectively. CONCLUSION: The proposed framework enables reconstruction of time-resolved, subject-specific aortic geometries from a limited number of standard cine 2D MRI acquisitions, providing a practical basis for downstream computational analysis.

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Publication Details

Journal
Computer Methods and Programs in Biomedicine
Published
2026-04-29
DOI
https://doi.org/10.1016/j.cmpb.2026.109425
Primary Topic
Medical Image Segmentation Techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

Time-resolved aortic 3D shape reconstruction from a limited number of cine 2D MRI slices

Gloria Wolkerstorfer, Stefano Buoso, Jochen von Spiczak, Rabea Schlenker et al.
Computer Methods and Programs in Biomedicine
Medical Image Segmentation Techniques
article

Time-resolved aortic 3D shape reconstruction from a limited number of cine 2D MRI slices

Gloria Wolkerstorfer, Stefano Buoso, Jochen von Spiczak, Rabea Schlenker, Sebastian Kozerke, Robert Manka
article en

Abstract

BACKGROUND AND OBJECTIVE: To assess the feasibility and accuracy of reconstructing time-resolved, three-dimensional, subject-specific aortic geometries from a limited number of standard cine 2D magnetic resonance imaging (MRI) acquisitions. This is achieved by coupling a statistical shape model with a differentiable volumetric mesh optimization algorithm. METHODS: Cine 2D MRI slices were manually segmented and used to reconstruct subject-specific aortic geometries via a differentiable mesh optimization algorithm, constrained by a statistical shape model. Optimal slice positioning was first evaluated on synthetic data, followed by in-vivo acquisition in 30 subjects (19 volunteers and 11 aortic stenosis patients). Time-resolved aortic geometries were reconstructed, from which geometric descriptors and radial strain were derived. In a subset of 10 subjects, 4D flow MRI data was acquired to provide volumetric reference for peak-systolic shape comparison. RESULTS: for the young, mid-age, and elderly groups, respectively. CONCLUSION: The proposed framework enables reconstruction of time-resolved, subject-specific aortic geometries from a limited number of standard cine 2D MRI acquisitions, providing a practical basis for downstream computational analysis.

Computer Methods and Programs in BiomedicineVol. 282
ETH Zurich (CH), Institute for Biomedical Engineering (CH), University Hospital of Zurich (CH)
Microsoft Research, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, Schweizerische Herzstiftung
Sustainable cities and communities
Openalex Percentile: Top 11%
Medical Image Segmentation Techniques
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