Integrative and interactive genomic analyses guiding personalized combined therapy improve clinical benefit in metastatic patients: A monocentric real-life experience

While precision medicine is increasingly available, the first trials produced disappointing results, partly due to limitations of molecular profiling to mutational analyses. Here, we report a monocentric real-life experience of an integrative and interactive approach using a dedicated genomic platform for metastatic cancer patients in a situation of therapeutic failure. From October 2020 to May 2024, 1049 patients with cancers in a situation of treatment failure have been prospectively enrolled in the national program "France Médecine Génomique 2025", 73 patients from Avicenne Hospital. Data from 20 patients with hepatocellular carcinoma were previously reported. We report here data from 27 among the remaining patients. For each patient, Sequencing Omics Information Analysis platform performed tumor and germline whole-genome, whole-exome sequencing, and RNAseq to receive tailored treatments. Tumor responses and survival data were systematically collected. Twenty-seven patients with locally advanced or metastatic cancers from twenty histological types received 32 treatment lines, 37.5% being ESCAT-I/II (high-proof efficacy level). 40% of lines were guided in part by transcriptomic analyses. Median treatment duration was 15.6 months, and median survival was not linked to ESCAT category. SeqOIA-tailored treatment outperformed previous lines, with a Growth Modulation Index≥ 1.33 for 70% of the patients. 69% of treatment lines were combined therapies, showing greater clinical benefit (86% vs. 54%, P < 0.01) and longer survival than monotherapies (15.8 vs. 13.9 months, HR=0.77, P = 0.01). Our monocentric real-life experience of interactive multidisciplinary care based on integrative genomic analyses improved survival of metastatic cancer patients using off-label combined personalized therapies.

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Journal
Biomedicine & Pharmacotherapy
Published
2026-04-30
DOI
https://doi.org/10.1016/j.biopha.2026.119402
Primary Topic
Cancer Genomics and Diagnostics
Type
article
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Integrative and interactive genomic analyses guiding personalized combined therapy improve clinical benefit in metastatic patients: A monocentric real-life experience

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Integrative and interactive genomic analyses guiding personalized combined therapy improve clinical benefit in metastatic patients: A monocentric real-life experience

Géraldine Falgarone, Diaddin Hamdan, Jacquès Cadranel, Jelena Filipović, Nicolas Derive, Lorraine Blaise, Guilhem Bousquet, Karen Leroy, Hélène Blons, Amal Ait-Omar, Michaël Soussan, Laëtitia Marisa, Claire Davoine, Eurydice Angeli, Frédéric Pamoukdjian, A C Rahy Martin, Emma Anjorand, Pierre Laurent-Puig, Marianne Ziol, Jaqueline Lehmann-Che
article en

Abstract

While precision medicine is increasingly available, the first trials produced disappointing results, partly due to limitations of molecular profiling to mutational analyses. Here, we report a monocentric real-life experience of an integrative and interactive approach using a dedicated genomic platform for metastatic cancer patients in a situation of therapeutic failure. From October 2020 to May 2024, 1049 patients with cancers in a situation of treatment failure have been prospectively enrolled in the national program "France Médecine Génomique 2025", 73 patients from Avicenne Hospital. Data from 20 patients with hepatocellular carcinoma were previously reported. We report here data from 27 among the remaining patients. For each patient, Sequencing Omics Information Analysis platform performed tumor and germline whole-genome, whole-exome sequencing, and RNAseq to receive tailored treatments. Tumor responses and survival data were systematically collected. Twenty-seven patients with locally advanced or metastatic cancers from twenty histological types received 32 treatment lines, 37.5% being ESCAT-I/II (high-proof efficacy level). 40% of lines were guided in part by transcriptomic analyses. Median treatment duration was 15.6 months, and median survival was not linked to ESCAT category. SeqOIA-tailored treatment outperformed previous lines, with a Growth Modulation Index≥ 1.33 for 70% of the patients. 69% of treatment lines were combined therapies, showing greater clinical benefit (86% vs. 54%, P < 0.01) and longer survival than monotherapies (15.8 vs. 13.9 months, HR=0.77, P = 0.01). Our monocentric real-life experience of interactive multidisciplinary care based on integrative genomic analyses improved survival of metastatic cancer patients using off-label combined personalized therapies.

Biomedicine & PharmacotherapyVol. 199
Délégation Paris 5 (FR), Centre National de la Recherche Scientifique (FR), Inserm (FR), Université Paris Cité (FR), Sorbonne Université (FR), University of Belgrade (RS), Université Sorbonne Paris Nord (FR), Sorbonne Paris Cité (FR), Centre de Recherche des Cordeliers (FR), Assistance Publique – Hôpitaux de Paris (FR), Hôpital Européen Georges-Pompidou (FR), Hôpital Avicenne (FR), Institute of Public Health of Serbia (RS), Hôpital Saint-Louis (FR), Hôpital La Porte Verte (FR), Hôpital Tenon (FR)
Openalex Percentile: Top 11%
Cancer Genomics and Diagnostics
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