Integrated Mathematical Model of Structural Biology and Non-equilibrium Thermodynamics ~ Topological Phase Adsorption of Proteins Governed by the Spatial Constant Delta = 0.010638 ~

This study provides mathematical and statistical proof that the conventional interpretation of the Ramachandran space in protein tertiary structure formation is an analytical bias lacking the evaluation of the chiral hydration network. By analyzing 166,541 residues from high-resolution PDB data (less than or equal to 1.5 Angstrom), the author identified a strict convergence (338.24 sigma) to a singular point based on a mathematical phase inversion model. The observed offset in phase adsorption distance matches the spatial constant Delta = 0.010638 with an accuracy of 99.98%. This work redefines life phenomena as a dissipative structure following entropy production minimization within the 14th physical constant optimization phase of the universe.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-05-01
DOI
https://doi.org/10.5281/zenodo.19952046
Primary Topic
Origins and Evolution of Life
Type
article
Field-Weighted Citation Impact
0.00
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article

Integrated Mathematical Model of Structural Biology and Non-equilibrium Thermodynamics ~ Topological Phase Adsorption of Proteins Governed by the Spatial Constant Delta = 0.010638 ~

Akira Tsuyoshi
Zenodo (CERN European Organization for Nuclear Research)
Origins and Evolution of Life
article

Integrated Mathematical Model of Structural Biology and Non-equilibrium Thermodynamics ~ Topological Phase Adsorption of Proteins Governed by the Spatial Constant Delta = 0.010638 ~

Akira Tsuyoshi
article en

Abstract

This study provides mathematical and statistical proof that the conventional interpretation of the Ramachandran space in protein tertiary structure formation is an analytical bias lacking the evaluation of the chiral hydration network. By analyzing 166,541 residues from high-resolution PDB data (less than or equal to 1.5 Angstrom), the author identified a strict convergence (338.24 sigma) to a singular point based on a mathematical phase inversion model. The observed offset in phase adsorption distance matches the spatial constant Delta = 0.010638 with an accuracy of 99.98%. This work redefines life phenomena as a dissipative structure following entropy production minimization within the 14th physical constant optimization phase of the universe.

Zenodo (CERN European Organization for Nuclear Research)
Oldham Council (GB)
Openalex Percentile: Top 5%
Origins and Evolution of Life
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Integrated Mathematical Model of Structural Biology and Non-equilibrium Thermodynamics ~ Topological Phase Adsorption of Proteins Governed by the Spatial Constant Delta = 0.010638 ~ — Akira Tsuyoshi · Zenodo (CERN European Organization for Nuclear Research) (2026) | TGRS Research Map | TGRS