DNA Triangular Prism Based Tripedal Walking Along Triplex‐Forming Track

We herein propose a smart tripedal DNA walking nanomachine based on the nanostructure transition of DNA triangular prism (TPDNA), which performs satisfactorily for highly sensitive analysis of miRNA biomarkers. Split DNAzyme sequences are integrated in the TPDNA with suppressed activity. With target sequence-mediated catalytic hairpin assembly, TPDNA structural transformation relives the blockage and the triple active DNAzyme units function as the driver of the DNA nanomachine. In addition, the triplex-forming track on the surface of electrode suffers the cleavage reaction and the declined signal is utilized to indicate the level of target miRNA. The track can be further regenerated by simply changing pH conditions, improving the stability and reducing the cost. Excellent performances are well validated and the feasibilities in complex biological samples are also demonstrated. This strategy integrates the advantages of DNA dynamic nanomachine and DNA structural transition, which holds great potential for nucleic acid-based studies and clinical diagnostics.

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Publication Details

Journal
Small
Published
2026-05-01
DOI
https://doi.org/10.1002/smll.73611
Primary Topic
Advanced biosensing and bioanalysis techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

DNA Triangular Prism Based Tripedal Walking Along Triplex‐Forming Track

Hua Chai, Xingye Zheng, Tingting Wang, Peng Miao
Small
Advanced biosensing and bioanalysis techniques
article

DNA Triangular Prism Based Tripedal Walking Along Triplex‐Forming Track

Hua Chai, Xingye Zheng, Tingting Wang, Peng Miao
article en

Abstract

We herein propose a smart tripedal DNA walking nanomachine based on the nanostructure transition of DNA triangular prism (TPDNA), which performs satisfactorily for highly sensitive analysis of miRNA biomarkers. Split DNAzyme sequences are integrated in the TPDNA with suppressed activity. With target sequence-mediated catalytic hairpin assembly, TPDNA structural transformation relives the blockage and the triple active DNAzyme units function as the driver of the DNA nanomachine. In addition, the triplex-forming track on the surface of electrode suffers the cleavage reaction and the declined signal is utilized to indicate the level of target miRNA. The track can be further regenerated by simply changing pH conditions, improving the stability and reducing the cost. Excellent performances are well validated and the feasibilities in complex biological samples are also demonstrated. This strategy integrates the advantages of DNA dynamic nanomachine and DNA structural transition, which holds great potential for nucleic acid-based studies and clinical diagnostics.

Small
University of Science and Technology of China (CN), Chinese Academy of Sciences (CN), Suzhou University of Science and Technology (CN), Suzhou Institute of Biomedical Engineering and Technology (CN)
National Key Research and Development Program of China
Openalex Percentile: Top 12%
Advanced biosensing and bioanalysis techniques
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DNA Triangular Prism Based Tripedal Walking Along Triplex‐Forming Track — Hua Chai, Xingye Zheng, et al. · Small (2026) | TGRS Research Map | TGRS