The Design of Metal Ion‐Induced Dimers Suggestive of 3D Domain Swapping

and the histidine residues within the His-Pro repeats. This predicted structure remained stable during 100-ns molecular dynamics simulations. These experimental and computational evaluations suggest that the insertion of His-Pro repeats into loops is an effective strategy for designing metal ion-induced dimers suggestive of 3D domain-swapped dimers. Our results provide insights into expanding the design space of artificial metal ion-dependent protein dimers and advancing our understanding of the structural principles of metalloproteins.

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Publication Details

Journal
ChemBioChem
Published
2026-04-30
DOI
https://doi.org/10.1002/cbic.70363
Primary Topic
Protein Structure and Dynamics
Type
article
Field-Weighted Citation Impact
0.00

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article

The Design of Metal Ion‐Induced Dimers Suggestive of 3D Domain Swapping

Kenta Hongo, Norio Yoshida, Kodai Kanemaru, Shota Shiga et al.
ChemBioChem
Protein Structure and Dynamics
article

The Design of Metal Ion‐Induced Dimers Suggestive of 3D Domain Swapping

Kenta Hongo, Norio Yoshida, Kodai Kanemaru, Shota Shiga, Koki Makabe, Seiya Sugiyama, Satoshi Ito
article en

Abstract

and the histidine residues within the His-Pro repeats. This predicted structure remained stable during 100-ns molecular dynamics simulations. These experimental and computational evaluations suggest that the insertion of His-Pro repeats into loops is an effective strategy for designing metal ion-induced dimers suggestive of 3D domain-swapped dimers. Our results provide insights into expanding the design space of artificial metal ion-dependent protein dimers and advancing our understanding of the structural principles of metalloproteins.

ChemBioChemVol. 27(9)
Yamagata University (JP), Japan Advanced Institute of Science and Technology (JP), Kyoto University (JP), Nagoya University (JP)
Japan Society for the Promotion of Science, Japan Science and Technology Agency
Openalex Percentile: Top 12%
Protein Structure and Dynamics
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