Cell type-specific alterations in fatty acid metabolism in neuronal subpopulations of schizophrenia and construction of a diagnostic model

Objective: This study integrates single-cell and bulk RNA-seq to investigate cell type-specific alterations in fatty acid metabolism-related genes in the dorsolateral prefrontal cortex (DLPFC) of schizophrenia (SCZ) patients and to evaluate their potential as diagnostic biomarkers. Methods: Integrating single-cell sequencing data (9 SCZ patients and 14 controls) and Bulk RNA-seq data (GSE174407, GSE107638), cell subpopulation identification and annotation were performed using Seurat. Key genes were identified by integrating differential gene screening, transcriptional regulatory network construction (SCENIC), pseudotime analysis (Monocle 2), and functional enrichment. A multi-gene diagnostic model was established using LASSO regression. Model performance was validated using ROC curves, nomograms, and immune cell correlation analysis. Finally, an MK-801-induced mouse SCZ model was used to validate the expression of key genes via qPCR. Results: < 0.001). Conclusion: This study reveals cell type-specific dysregulation of fatty acid metabolism in SCZ and provides a robust five-gene diagnostic model with translational potential.

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Publication Details

Journal
Frontiers in Psychiatry
Published
2026-04-21
DOI
https://doi.org/10.3389/fpsyt.2026.1770038
Primary Topic
Tryptophan and brain disorders
Type
article
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0.00
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article

Cell type-specific alterations in fatty acid metabolism in neuronal subpopulations of schizophrenia and construction of a diagnostic model

Weiqi Zeng, Li L, Ping Yang, Cui Zhao et al.
Frontiers in Psychiatry
Tryptophan and brain disorders
article

Cell type-specific alterations in fatty acid metabolism in neuronal subpopulations of schizophrenia and construction of a diagnostic model

Weiqi Zeng, Li L, Ping Yang, Cui Zhao, Liang Zhang, Weiqi Xie
article en

Abstract

Objective: This study integrates single-cell and bulk RNA-seq to investigate cell type-specific alterations in fatty acid metabolism-related genes in the dorsolateral prefrontal cortex (DLPFC) of schizophrenia (SCZ) patients and to evaluate their potential as diagnostic biomarkers. Methods: Integrating single-cell sequencing data (9 SCZ patients and 14 controls) and Bulk RNA-seq data (GSE174407, GSE107638), cell subpopulation identification and annotation were performed using Seurat. Key genes were identified by integrating differential gene screening, transcriptional regulatory network construction (SCENIC), pseudotime analysis (Monocle 2), and functional enrichment. A multi-gene diagnostic model was established using LASSO regression. Model performance was validated using ROC curves, nomograms, and immune cell correlation analysis. Finally, an MK-801-induced mouse SCZ model was used to validate the expression of key genes via qPCR. Results: < 0.001). Conclusion: This study reveals cell type-specific dysregulation of fatty acid metabolism in SCZ and provides a robust five-gene diagnostic model with translational potential.

Frontiers in PsychiatryVol. 17
Hunan University of Traditional Chinese Medicine (CN), Hunan Institute of Mental Health (CN)
Openalex Percentile: Top 20%
Tryptophan and brain disorders
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