CrystalX: High-Accuracy Crystal Structure Analysis Using Deep Learning

Atomic structure analysis of crystalline materials is a paramount endeavor in both chemical and material sciences. This sophisticated technique necessitates not only a solid foundation in crystallography but also a profound comprehension of the intricacies of the accompanying software, posing a significant challenge in meeting rigorous daily demands. For the first time, we confront this challenge head-on by harnessing the power of deep learning for fully automated routine structure analysis at the full-atom level. To validate the performance of the model, named CrystalX, we employed a data set comprising over 50,000 X-ray diffraction measurements derived from authentic experiments. Under a strict temporal validation scheme that separates training and test data by publication time, CrystalX substantially outperformed the automated baseline and was adept at deciphering intricate geometric patterns. Remarkably, CrystalX revealed that even peer-reviewed publications harbor expert interpretation errors that can evade stringent CheckCIF A/B-level alerts, yet CrystalX adeptly rectifies them. It has already been successfully applied in our day-to-day pipeline, enabling fully automated, human-free structure analysis of newly discovered compounds. Overall, CrystalX marks the beginning of a new era of automating routine structural analysis within self-driving laboratories.

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Publication Details

Journal
Journal of the American Chemical Society
Published
2026-04-20
DOI
https://doi.org/10.1021/jacs.5c21832
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00

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article

CrystalX: High-Accuracy Crystal Structure Analysis Using Deep Learning

Yuqiang Li, Weiran Huang, Kaipeng Zheng, Han-Sen Zhong et al.
Journal of the American Chemical Society
Machine Learning in Materials Science
article

CrystalX: High-Accuracy Crystal Structure Analysis Using Deep Learning

Yuqiang Li, Weiran Huang, Kaipeng Zheng, Han-Sen Zhong, Wanli Ouyang
article en

Abstract

Atomic structure analysis of crystalline materials is a paramount endeavor in both chemical and material sciences. This sophisticated technique necessitates not only a solid foundation in crystallography but also a profound comprehension of the intricacies of the accompanying software, posing a significant challenge in meeting rigorous daily demands. For the first time, we confront this challenge head-on by harnessing the power of deep learning for fully automated routine structure analysis at the full-atom level. To validate the performance of the model, named CrystalX, we employed a data set comprising over 50,000 X-ray diffraction measurements derived from authentic experiments. Under a strict temporal validation scheme that separates training and test data by publication time, CrystalX substantially outperformed the automated baseline and was adept at deciphering intricate geometric patterns. Remarkably, CrystalX revealed that even peer-reviewed publications harbor expert interpretation errors that can evade stringent CheckCIF A/B-level alerts, yet CrystalX adeptly rectifies them. It has already been successfully applied in our day-to-day pipeline, enabling fully automated, human-free structure analysis of newly discovered compounds. Overall, CrystalX marks the beginning of a new era of automating routine structural analysis within self-driving laboratories.

Journal of the American Chemical Society
Shanghai Jiao Tong University (CN), Beijing Academy of Artificial Intelligence (CN), Shanghai Artificial Intelligence Laboratory (CN)
Tencent, National Natural Science Foundation of China, National Science and Technology Major Project, Microsoft Research Asia
Quality Education
Openalex Percentile: Top 14%
Machine Learning in Materials Science
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