Characterization of the OsEXO70 gene family and their response to salt stress in rice

EXO70 is a key subunit of the exocyst tethering complex involved in vesicle trafficking and plays important roles in plant growth, development, and stress responses. however, Systematic bioinformatic and transcriptional analyses of the EXO70 gene family in rice under salt stress remain unreported. Here, 38 OsEXO70 genes were identified and classified into nine subfamilies (A–I). These genes are unevenly distributed across chromosomes, with 10 segmental duplication events identified. Structural analyses revealed subfamily-specific features, including OsEXO70C1, OsEXO70H1, OsEXO70H3, and OsEXO70I14 were identified as single‑exon genes lacking UTRs. Promoter regions were enriched in hormone‑ and stress‑responsive cis‑elements. Expression profiling showed tissue-specific patterns, with OsEXO70G2 highly expressed in floral organs and most OsEXO70I members exhibiting low basal expression. Under salt stress, subfamilies OsEXO70A, B, C, and E were generally downregulated, whereas OsEXO70D, G, H, and I were upregulated, with OsEXO70I3 and OsEXO70I12 being most strongly induced. This study provides a comprehensive characterization of the OsEXO70 family and a foundation for further functional studies on their roles in salt stress adaptation.

Authors

Institutions

Publication Details

Journal
BMC Genomics
Published
2026-04-21
DOI
https://doi.org/10.1186/s12864-026-12860-2
Primary Topic
Plant Stress Responses and Tolerance
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Characterization of the OsEXO70 gene family and their response to salt stress in rice

Tongyuan Yu, Quanxiang Tian, Jie Liang, Yunxia Fang et al.
BMC Genomics
Plant Stress Responses and Tolerance
article

Characterization of the OsEXO70 gene family and their response to salt stress in rice

Tongyuan Yu, Quanxiang Tian, Jie Liang, Yunxia Fang, Ye Lou, Mengying Jiang, Siying Cui, Yuan Xue, Jiadong Ren, Lingxing Ma, Dawei Xue, Kejia Zhu
article en

Abstract

EXO70 is a key subunit of the exocyst tethering complex involved in vesicle trafficking and plays important roles in plant growth, development, and stress responses. however, Systematic bioinformatic and transcriptional analyses of the EXO70 gene family in rice under salt stress remain unreported. Here, 38 OsEXO70 genes were identified and classified into nine subfamilies (A–I). These genes are unevenly distributed across chromosomes, with 10 segmental duplication events identified. Structural analyses revealed subfamily-specific features, including OsEXO70C1, OsEXO70H1, OsEXO70H3, and OsEXO70I14 were identified as single‑exon genes lacking UTRs. Promoter regions were enriched in hormone‑ and stress‑responsive cis‑elements. Expression profiling showed tissue-specific patterns, with OsEXO70G2 highly expressed in floral organs and most OsEXO70I members exhibiting low basal expression. Under salt stress, subfamilies OsEXO70A, B, C, and E were generally downregulated, whereas OsEXO70D, G, H, and I were upregulated, with OsEXO70I3 and OsEXO70I12 being most strongly induced. This study provides a comprehensive characterization of the OsEXO70 family and a foundation for further functional studies on their roles in salt stress adaptation.

BMC Genomics
Hangzhou Normal University (CN)
National Natural Science Foundation of China
Zero hunger
Openalex Percentile: Top 18%
Plant Stress Responses and Tolerance
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Characterization of the OsEXO70 gene family and their response to salt stress in rice — Tongyuan Yu, Quanxiang Tian, et al. · BMC Genomics (2026) | TGRS Research Map | TGRS