Robust MR-AIV: A Systematic Study of Robustness Improvement and Sensitivity Analysis of MR-AIV

Cerebrospinal and interstitial fluid transport play a central role in brain metabolic waste clearance, yet non-invasive quantification of deep-brain flow dynamics remains challenging. Magnetic Resonance Artificial Intelligence Velocimetry (MR-AIV) is a physics-informed neural network framework that infers three-dimensional velocity, pressure, and permeability fields from dynamic contrast-enhanced MRI by embedding porous-media flow physics into the learning process. Here, we present a methodological refinement and systematic evaluation of MR-AIV. We introduce a universal, anatomically informed, region-of-interest-based permeability initialization that improves anatomical alignment and physical consistency across subjects. We quantify the sensitivity of inferred fields to key modelling choices, including initialization strategies, permeability bounds, diffusivity assumptions, signal-concentration relationships, and measurement noise. Across these conditions, MR-AIV yields stable velocity and permeability estimates with preserved spatial structure. Together, these results establish practical guidelines and identify stable operating regimes for reliable deployment of MR-AIV. By improving robustness and reproducibility, this work strengthens MR-AIV as a minimally invasive approach for mapping brain-wide porous fluid transport and supports its application to studies of neurological health and disease.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-04-17
DOI
https://doi.org/10.64898/2026.04.14.718498
Primary Topic
Cerebrospinal fluid and hydrocephalus
Type
article
Field-Weighted Citation Impact
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article

Robust MR-AIV: A Systematic Study of Robustness Improvement and Sensitivity Analysis of MR-AIV

George Em Karniadakis, Yisen Guo, Ryszard S. Gomolka, Douglas H. Kelley et al.
bioRxiv (Cold Spring Harbor Laboratory)
Cerebrospinal fluid and hydrocephalus
article

Robust MR-AIV: A Systematic Study of Robustness Improvement and Sensitivity Analysis of MR-AIV

George Em Karniadakis, Yisen Guo, Ryszard S. Gomolka, Douglas H. Kelley, Kimberly A. Stevens, Juan Diego Toscano, Mohammad Vaezi
article en

Abstract

Cerebrospinal and interstitial fluid transport play a central role in brain metabolic waste clearance, yet non-invasive quantification of deep-brain flow dynamics remains challenging. Magnetic Resonance Artificial Intelligence Velocimetry (MR-AIV) is a physics-informed neural network framework that infers three-dimensional velocity, pressure, and permeability fields from dynamic contrast-enhanced MRI by embedding porous-media flow physics into the learning process. Here, we present a methodological refinement and systematic evaluation of MR-AIV. We introduce a universal, anatomically informed, region-of-interest-based permeability initialization that improves anatomical alignment and physical consistency across subjects. We quantify the sensitivity of inferred fields to key modelling choices, including initialization strategies, permeability bounds, diffusivity assumptions, signal-concentration relationships, and measurement noise. Across these conditions, MR-AIV yields stable velocity and permeability estimates with preserved spatial structure. Together, these results establish practical guidelines and identify stable operating regimes for reliable deployment of MR-AIV. By improving robustness and reproducibility, this work strengthens MR-AIV as a minimally invasive approach for mapping brain-wide porous fluid transport and supports its application to studies of neurological health and disease.

bioRxiv (Cold Spring Harbor Laboratory)
University of Copenhagen (DK), Brown University (US), University of Rochester (US)
Openalex Percentile: Top 23%
Cerebrospinal fluid and hydrocephalus
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