1H NMR-based serum metabolomics identifies discriminatory metabolic signatures associated with pancreatic cancer

Pancreatic cancer (PC) remains one of the most aggressive malignancies, characterized by late-stage diagnosis and poor prognosis. Identifying reliable biomarkers for early detection is crucial to improving survival outcomes. This study utilizes proton nuclear magnetic resonance (1H-NMR) metabolomics to analyze serum metabolic profiles and identify potential biomarkers differentiating PC patients from healthy controls (HC). Serum samples were collected from PC patients and matched HC individuals. 1H-NMR spectroscopy was employed to profile circulatory metabolites. Multivariate statistical analyses, including Principal Component Analysis (PCA) and Partial Least Squares Discriminates Analysis (PLS-DA), were conducted to distinguish between PC and HC groups. Receiver Operating Characteristic (ROC) curve analysis was performed to evaluate the diagnostic potential of key metabolites. Pathway enrichment analysis further elucidated the metabolic alterations associated with PC progression. The metabolomic profiling revealed distinct differences in metabolite composition between PC and HC groups. Amino acids, crucial for cellular metabolism and protein synthesis, were significantly reduced in the PC group (12.02%) compared to the HC group (18.43%). Conversely, carbohydrate metabolites, including glucose and lactate, were elevated in PC (56.92%) relative to HC (47.38%), indicating enhanced glycolytic activity. PCA and PLS-DA analyses confirmed clear metabolic separation between groups (PERMANOVA p = 0.001, PLS-DA R2 = 0.87, Q2 = 0.73). Key metabolites differentiating PC from HC included methanol, glycine, and lactate for PC, and valine, alanine, and methylhistidine for HC. ROC analysis identified alanine (AUC = 0.96), isoleucine (AUC = 0.92), and valine (AUC = 0.93) as potential diagnostic biomarkers. Pathway analysis revealed significant alterations in amino acid metabolism, notably the alanine, aspartate, and glutamate metabolism pathway. This study demonstrates the utility of 1H-NMR-based serum metabolomics in distinguishing PC from HC and identifies potential biomarkers for metabolic alterations associated with PC. The findings underscore the critical role of metabolic reprogramming in PC and offer promising avenues for developing non-invasive diagnostic tools. Further validation in larger cohorts is warranted to confirm the diagnostic potential of the identified biomarkers.

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Journal
Scientific Reports
Published
2026-04-17
DOI
https://doi.org/10.1038/s41598-026-39786-9
Primary Topic
Metabolomics and Mass Spectrometry Studies
Type
article
Field-Weighted Citation Impact
0.00

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article

1H NMR-based serum metabolomics identifies discriminatory metabolic signatures associated with pancreatic cancer

Sudhir Kumar Shekhar, Dilutpal Sharma, Gaurav Pandey, Abhai Verma et al.
Scientific Reports
Metabolomics and Mass Spectrometry Studies
article

1H NMR-based serum metabolomics identifies discriminatory metabolic signatures associated with pancreatic cancer

Sudhir Kumar Shekhar, Dilutpal Sharma, Gaurav Pandey, Abhai Verma, Ashish Gupta, Umesh Kumar
article en

Abstract

Pancreatic cancer (PC) remains one of the most aggressive malignancies, characterized by late-stage diagnosis and poor prognosis. Identifying reliable biomarkers for early detection is crucial to improving survival outcomes. This study utilizes proton nuclear magnetic resonance (1H-NMR) metabolomics to analyze serum metabolic profiles and identify potential biomarkers differentiating PC patients from healthy controls (HC). Serum samples were collected from PC patients and matched HC individuals. 1H-NMR spectroscopy was employed to profile circulatory metabolites. Multivariate statistical analyses, including Principal Component Analysis (PCA) and Partial Least Squares Discriminates Analysis (PLS-DA), were conducted to distinguish between PC and HC groups. Receiver Operating Characteristic (ROC) curve analysis was performed to evaluate the diagnostic potential of key metabolites. Pathway enrichment analysis further elucidated the metabolic alterations associated with PC progression. The metabolomic profiling revealed distinct differences in metabolite composition between PC and HC groups. Amino acids, crucial for cellular metabolism and protein synthesis, were significantly reduced in the PC group (12.02%) compared to the HC group (18.43%). Conversely, carbohydrate metabolites, including glucose and lactate, were elevated in PC (56.92%) relative to HC (47.38%), indicating enhanced glycolytic activity. PCA and PLS-DA analyses confirmed clear metabolic separation between groups (PERMANOVA p = 0.001, PLS-DA R2 = 0.87, Q2 = 0.73). Key metabolites differentiating PC from HC included methanol, glycine, and lactate for PC, and valine, alanine, and methylhistidine for HC. ROC analysis identified alanine (AUC = 0.96), isoleucine (AUC = 0.92), and valine (AUC = 0.93) as potential diagnostic biomarkers. Pathway analysis revealed significant alterations in amino acid metabolism, notably the alanine, aspartate, and glutamate metabolism pathway. This study demonstrates the utility of 1H-NMR-based serum metabolomics in distinguishing PC from HC and identifies potential biomarkers for metabolic alterations associated with PC. The findings underscore the critical role of metabolic reprogramming in PC and offer promising avenues for developing non-invasive diagnostic tools. Further validation in larger cohorts is warranted to confirm the diagnostic potential of the identified biomarkers.

Scientific Reports
King George's Medical University (IN), Medanta The Medicity (IN), Centre of Biomedical Research (IN)
Indian Council of Medical Research
Reduced inequalities
Openalex Percentile: Top 7%
Metabolomics and Mass Spectrometry Studies
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