Structural analyses uncover protease-adhesin interactions and c-di-GMP receptor regulation in sulfate-reducing bacteria

Desulfovibrio vulgaris is a sulfate-reducing organism with biofim-forming capacity relevant for bioremediation and microbe-induced corrosion. Biofilm formation of D. vulgaris depends on two large adhesins that are regulated by proteins encoded in the Dvh operon, which resembles the gammaproteobacterial Lap system in composition but differs in the sequence and domain organization of its regulatory proteins, DvhG and DvhD. We show that DvhG is a calcium-dependent protease that targets the periplasmic domains of both adhesins via extensive interactions. Additionally, structures of DvhD establish this HD-GYP domain-containing protein as a c-di-GMP-dependent switch with a periplasmic dCache domain. Our data support a model in which DvhD controls DvhG activity through a c-di-GMP-dependent mechanism that is molecularly distinct, but functionally analogous to LapD. Together, our results reveal how conserved regulatory logic can be implemented through distinct molecular architectures, highlighting the evolutionary flexibility of c-di-GMP signaling networks in controlling surface attachment across diverse bacterial lineages.

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Journal
Nature Communications
Published
2026-04-17
DOI
https://doi.org/10.1038/s41467-026-71936-5
Primary Topic
Bacterial biofilms and quorum sensing
Type
article
Field-Weighted Citation Impact
0.00

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article

Structural analyses uncover protease-adhesin interactions and c-di-GMP receptor regulation in sulfate-reducing bacteria

Amruta Karbelkar, Justin D Lormand, Holger Sondermann, Maria E. Font et al.
Nature Communications
Bacterial biofilms and quorum sensing
article

Structural analyses uncover protease-adhesin interactions and c-di-GMP receptor regulation in sulfate-reducing bacteria

Amruta Karbelkar, Justin D Lormand, Holger Sondermann, Maria E. Font, Sofia Mortensen, María J. García‐García, George A. O’Toole
article en

Abstract

Desulfovibrio vulgaris is a sulfate-reducing organism with biofim-forming capacity relevant for bioremediation and microbe-induced corrosion. Biofilm formation of D. vulgaris depends on two large adhesins that are regulated by proteins encoded in the Dvh operon, which resembles the gammaproteobacterial Lap system in composition but differs in the sequence and domain organization of its regulatory proteins, DvhG and DvhD. We show that DvhG is a calcium-dependent protease that targets the periplasmic domains of both adhesins via extensive interactions. Additionally, structures of DvhD establish this HD-GYP domain-containing protein as a c-di-GMP-dependent switch with a periplasmic dCache domain. Our data support a model in which DvhD controls DvhG activity through a c-di-GMP-dependent mechanism that is molecularly distinct, but functionally analogous to LapD. Together, our results reveal how conserved regulatory logic can be implemented through distinct molecular architectures, highlighting the evolutionary flexibility of c-di-GMP signaling networks in controlling surface attachment across diverse bacterial lineages.

Nature CommunicationsVol. 17(1)
Dartmouth College (US), Deutsches Elektronen-Synchrotron DESY (DE), Christian-Albrechts-Universität zu Kiel (DE), Centre for Structural Systems Biology (DE)
Deutsche Forschungsgemeinschaft, National Institutes of Health, Deutsches Elektronen-Synchrotron, National Institute of Allergy and Infectious Diseases
Openalex Percentile: Top 24%
Bacterial biofilms and quorum sensing
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Structural analyses uncover protease-adhesin interactions and c-di-GMP receptor regulation in sulfate-reducing bacteria — Amruta Karbelkar, Justin D Lormand, et al. · Nature Communications (2026) | TGRS Research Map | TGRS