AI-guided discovery of the IRF4-PAICS-LDHA axis as a multitarget hub linking tumor metabolism to CD8+ T cell exhaustion in DLBCL
Diffuse large B-cell lymphoma (DLBCL) features an immunosuppressive tumor microenvironment (TME), yet the molecular drivers connecting metabolic reprogramming to immune evasion remain poorly defined. Here, we deployed an integrative single-cell transcriptomic analysis combined with a machine learning (ML) framework to systematically identify key immune-suppressive hubs in DLBCL. Through ML-driven prioritization of a 33-gene panel, PAICS emerged as a central node within an immunosuppressive B-cell subgroup. Functional assays confirmed that PAICS promotes lymphoma proliferation, survival, and tumor growth while establishing an immunosuppressive TME-marked by reduced IFN‑γ, elevated TGF‑β and IL‑10, and enhanced CD8⁺ T cell exhaustion. Mechanistically, we uncovered the IRF4-PAICS-LDHA axis: IRF4 transcriptionally activates PAICS, which physically interacts with LDHA to augment its activity, thereby skewing the NAD⁺/NADH balance toward metabolic immunosuppression. Importantly, our AI-aided approach not only identified this axis but also predicted its vulnerability to metabolic intervention: both methotrexate treatment and LDHA knockdown restored metabolic balance, reversed T‑cell exhaustion, and suppressed tumor growth. These findings highlight the power of ML in uncovering multi-targetable metabolic-immune networks and in guiding therapeutic strategies to overcome immune evasion in DLBCL.
Authors
- Wenhua Li (ORCID: https://orcid.org/0000-0002-9457-6662)
- Shaoxuan Wu
- Liye Wang
- Zhiqi Zhang (ORCID: https://orcid.org/0009-0001-7214-1959)
- Xufeng Wei
- Qing Yang
- E J Liu
- M L Yang
- Zeyuan Wang
- Meng Dong
- Yue Zhang
- Siyu Qian
- Xudong Zhang
- Zhenzhen Yang
- Hui Meng
- Guozhong Jiang
- Qingjiang Chen
Institutions
- Henan Academy of Sciences (CN)
- First Affiliated Hospital of Zhengzhou University (CN)
Publication Details
- Journal
- npj Precision Oncology
- Published
- 2026-04-16
- DOI
- https://doi.org/10.1038/s41698-026-01428-8
- Primary Topic
- Cancer, Hypoxia, and Metabolism
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Henan Provincial Science and Technology Research Project