Optimization of SWCNT‐FET Biosensors by Aptamer Engineering and Toehold‐Mediated Strand Displacement

Aptamer-based single-walled carbon nanotube (SWCNT) field-effect transistor (FET) biosensors provide a compact, label-free, and sensitive platform for real-time biomarker detection. To enhance device performance, we employed a truncated DNA aptamer (CSS.3_cut3) with improved conformational switching upon cortisol binding, boosting the sensitivity of SWCNT-FET biosensors. We further optimized the functionalization using a toehold-mediated strand displacement (TMSD) strategy to dynamically integrate the aptamer onto SWCNTs in solution, simplifying the fabrication process and increasing the sensitivity. Interestingly, introducing a partially complementary protection strand during TMSD assembly resulted in bistable, two-level signal outputs upon cortisol sensing, contrasting with the gradual response of unprotected sensors. This effect likely stems from the competition between aptamer-target binding and residual hybridization, modulating signal dynamics via tuneable electrostatic gating. These results underscore the promise of aptamer engineering and DNA nanotechnology for developing high-performance biosensors with programmable behavior, offering new avenues for real-time sensing, dynamic molecular recognition, and integrated diagnostic technologies.

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Publication Details

Journal
Advanced Science
Published
2026-04-16
DOI
https://doi.org/10.1002/advs.75328
Primary Topic
Advanced biosensing and bioanalysis techniques
Type
article
Field-Weighted Citation Impact
0.00

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Optimization of SWCNT‐FET Biosensors by Aptamer Engineering and Toehold‐Mediated Strand Displacement

Chang‐Seuk Lee, Matteo Palma, Houlin Yu, Tingting Zheng et al.
Advanced Science
Advanced biosensing and bioanalysis techniques
article

Optimization of SWCNT‐FET Biosensors by Aptamer Engineering and Toehold‐Mediated Strand Displacement

Chang‐Seuk Lee, Matteo Palma, Houlin Yu, Tingting Zheng, Gustavo Sant'Anna, Gririraj Manoharan, Haosen Miao, Nicholas Bedfrod, Jorge L. Chávez
article en

Abstract

Aptamer-based single-walled carbon nanotube (SWCNT) field-effect transistor (FET) biosensors provide a compact, label-free, and sensitive platform for real-time biomarker detection. To enhance device performance, we employed a truncated DNA aptamer (CSS.3_cut3) with improved conformational switching upon cortisol binding, boosting the sensitivity of SWCNT-FET biosensors. We further optimized the functionalization using a toehold-mediated strand displacement (TMSD) strategy to dynamically integrate the aptamer onto SWCNTs in solution, simplifying the fabrication process and increasing the sensitivity. Interestingly, introducing a partially complementary protection strand during TMSD assembly resulted in bistable, two-level signal outputs upon cortisol sensing, contrasting with the gradual response of unprotected sensors. This effect likely stems from the competition between aptamer-target binding and residual hybridization, modulating signal dynamics via tuneable electrostatic gating. These results underscore the promise of aptamer engineering and DNA nanotechnology for developing high-performance biosensors with programmable behavior, offering new avenues for real-time sensing, dynamic molecular recognition, and integrated diagnostic technologies.

Advanced Science
Queen Mary University of London (GB), UNSW Sydney (AU), 59th Medical Wing (US), Seoul Women's University (KR)
National Research Foundation of Korea
Industry, innovation and infrastructure
Openalex Percentile: Top 12%
Advanced biosensing and bioanalysis techniques
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