Regression-based Modeling of Spearman’s Rho for Longitudinal Metabolomics and Mental Wellness in Breast Cancer Patients

Chemotherapy in breast cancer (BC) can substantially affect mental wellness. Advances in metabolomics enable comprehensive profiling of metabolic changes over time during and after treatment, offering insights into biological mechanisms linking chemotherapy to mental health outcomes. To study the association between metabolite profiles and mental wellness, correlation-based analyses are particularly useful. Spearman's rho is a widely used correlation measure and popular alternative to Pearson's correlation, since it also applies to non-linear association between variables. However, existing methods are not designed for longitudinal data and do not allow for covariate adjustments. In this paper, we propose a novel regression-based framework grounded in a class of semiparametric models, the functional response models, to extend this popular correlation measure to longitudinal settings with missing data under the missing at random assumption. This framework facilitates inferences about temporal changes in correlations over time and association of explanatory variables for such changes. We use simulation studies to evaluate performance of the approach with moderate sample sizes. We apply the approach to a one-year longitudinal substudy of the EPIGEN study to examine the longitudinal association between metabolite profiles and mental wellness in BC patients undergoing chemotherapy. The identified metabolites may serve as candidates for future in-depth bioinformatics analyses and translational investigations.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-04-16
DOI
https://doi.org/10.64898/2026.04.13.718341
Primary Topic
Metabolomics and Mass Spectrometry Studies
Type
article
Field-Weighted Citation Impact
0.00

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article

Regression-based Modeling of Spearman’s Rho for Longitudinal Metabolomics and Mental Wellness in Breast Cancer Patients

Xin Tu, Angela Starkweather, Bryan E. Shepherd, Shengjia Tu et al.
bioRxiv (Cold Spring Harbor Laboratory)
Metabolomics and Mass Spectrometry Studies
article

Regression-based Modeling of Spearman’s Rho for Longitudinal Metabolomics and Mental Wellness in Breast Cancer Patients

Xin Tu, Angela Starkweather, Bryan E. Shepherd, Shengjia Tu, Natalie Quach, Debra Lyon, Jinyuan Liu, Tuo Lin, Zhuochao Huang, Yiwen Chen, Timothy J Garrett, Toni Gui
article en

Abstract

Chemotherapy in breast cancer (BC) can substantially affect mental wellness. Advances in metabolomics enable comprehensive profiling of metabolic changes over time during and after treatment, offering insights into biological mechanisms linking chemotherapy to mental health outcomes. To study the association between metabolite profiles and mental wellness, correlation-based analyses are particularly useful. Spearman's rho is a widely used correlation measure and popular alternative to Pearson's correlation, since it also applies to non-linear association between variables. However, existing methods are not designed for longitudinal data and do not allow for covariate adjustments. In this paper, we propose a novel regression-based framework grounded in a class of semiparametric models, the functional response models, to extend this popular correlation measure to longitudinal settings with missing data under the missing at random assumption. This framework facilitates inferences about temporal changes in correlations over time and association of explanatory variables for such changes. We use simulation studies to evaluate performance of the approach with moderate sample sizes. We apply the approach to a one-year longitudinal substudy of the EPIGEN study to examine the longitudinal association between metabolite profiles and mental wellness in BC patients undergoing chemotherapy. The identified metabolites may serve as candidates for future in-depth bioinformatics analyses and translational investigations.

bioRxiv (Cold Spring Harbor Laboratory)
Rutgers, The State University of New Jersey (US), University of Florida (US), Neurobehavioral Systems (US), Human Longevity (United States) (US), Vanderbilt University Medical Center (US)
National Institutes of Health
Good health and well-being
Openalex Percentile: Top 26%
Metabolomics and Mass Spectrometry Studies
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