Fitness costs and persistence of plasmid-mediated cephalosporin resistance in Escherichia coli: an integrative review

, alongside a PRISMA-guided quantitative synthesis of 40 studies that provide data on the fitness consequences of resistance plasmids. We have analyzed a total of 154 experimental observations to identify patterns related to plasmid host background, resistance gene family, and fitness-assay framework. Because multiple observations were frequently contributed by the same study, we accounted for hierarchical structure using mixed-effects models with Study_ID as a random intercept and evaluated key patterns in the full dataset and stratified by assay type (growth curves vs. head-to-head competition assays). Moreover, we found that fitness estimates were sensitive to assay type. For instance, head-to-head competition experiments captured a broader range of deviations from neutrality than growth curve assays, although the apparent difference in mean standardized fitness between assay types was attenuated after accounting for study-level clustering. Across the curated dataset, host-associated and resistance gene-family-associated signals were method-dependent: both were evident overall and in head-to-head competition assays, but were not retained in growth-curve-only subsets. Our analysis supports a context-dependent interpretation in which plasmid-host compatibility, resistance-gene context, ecological setting, and the measurement framework jointly shape the observed fitness consequences and dissemination potential of resistance plasmids across environments.

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Publication Details

Journal
Frontiers in Microbiology
Published
2026-04-15
DOI
https://doi.org/10.3389/fmicb.2026.1783087
Primary Topic
Antibiotic Resistance in Bacteria
Type
article
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article

Fitness costs and persistence of plasmid-mediated cephalosporin resistance in Escherichia coli: an integrative review

Zachary D. Blount, Denyss Guilcazo, Gabriel Trueba (328365), António Machado et al.
Frontiers in Microbiology
Antibiotic Resistance in Bacteria
article

Fitness costs and persistence of plasmid-mediated cephalosporin resistance in Escherichia coli: an integrative review

Zachary D. Blount, Denyss Guilcazo, Gabriel Trueba (328365), António Machado, Pamela Cangui, Lázaro López
article en

Abstract

, alongside a PRISMA-guided quantitative synthesis of 40 studies that provide data on the fitness consequences of resistance plasmids. We have analyzed a total of 154 experimental observations to identify patterns related to plasmid host background, resistance gene family, and fitness-assay framework. Because multiple observations were frequently contributed by the same study, we accounted for hierarchical structure using mixed-effects models with Study_ID as a random intercept and evaluated key patterns in the full dataset and stratified by assay type (growth curves vs. head-to-head competition assays). Moreover, we found that fitness estimates were sensitive to assay type. For instance, head-to-head competition experiments captured a broader range of deviations from neutrality than growth curve assays, although the apparent difference in mean standardized fitness between assay types was attenuated after accounting for study-level clustering. Across the curated dataset, host-associated and resistance gene-family-associated signals were method-dependent: both were evident overall and in head-to-head competition assays, but were not retained in growth-curve-only subsets. Our analysis supports a context-dependent interpretation in which plasmid-host compatibility, resistance-gene context, ecological setting, and the measurement framework jointly shape the observed fitness consequences and dissemination potential of resistance plasmids across environments.

Frontiers in MicrobiologyVol. 17
Universidade dos Açores (PT), Faculdade de Tecnologia e Ciências (BR), Universidad San Francisco de Quito (EC), Michigan State University (US)
Life in Land
Openalex Percentile: Top 26%
Antibiotic Resistance in Bacteria
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