Edges: An expressive and efficient model for learning Graph Edit Distance

In this paper, we introduce Edges , a novel deep architecture that aims at predicting the Graph Edit Distance (GED). Edges reformulates the quadratic assignment problem (QAP) associated to the GED problem as an edge prediction task within a GED instance graph constructed from the input graph pair. It uses a 3-Weisfeiler-Lehman expressive GNN, enabling to embed structural information at the edge level on this GED instance graph . It bypasses the need for costly matching solvers by directly predicting a soft assignment matrix through an end-to-end architecture. Extensive experiments on benchmark datasets demonstrate that the method enhances prediction accuracy through structural awareness while maintaining computational efficiency. • Reframe graph edit distance as edge-level regression on a single instance graph. • Use a 3-WL edge-centric GNN with a quadratic readout built on metric embeddings. • Train end-to-end without combinatorial solvers and enable fast, batched inference. • Achieve state-of-the-art accuracy on AIDS, LINUX, and IMDB with low latency. • Offer a simple, scalable pipeline grounded in quadratic assignment for GED.

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Publication Details

Journal
Pattern Recognition
Published
2026-04-15
DOI
https://doi.org/10.1016/j.patcog.2026.113764
Primary Topic
Graph Theory and Algorithms
Type
article
Field-Weighted Citation Impact
0.00

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article

Edges: An expressive and efficient model for learning Graph Edit Distance

Pierre Héroux, Aldo Moscatelli, Florian Yger, Maxime Bérar et al.
Pattern Recognition
Graph Theory and Algorithms
article

Edges: An expressive and efficient model for learning Graph Edit Distance

Pierre Héroux, Aldo Moscatelli, Florian Yger, Maxime Bérar, SEBASTIEN ADAM
article en

Abstract

In this paper, we introduce Edges , a novel deep architecture that aims at predicting the Graph Edit Distance (GED). Edges reformulates the quadratic assignment problem (QAP) associated to the GED problem as an edge prediction task within a GED instance graph constructed from the input graph pair. It uses a 3-Weisfeiler-Lehman expressive GNN, enabling to embed structural information at the edge level on this GED instance graph . It bypasses the need for costly matching solvers by directly predicting a soft assignment matrix through an end-to-end architecture. Extensive experiments on benchmark datasets demonstrate that the method enhances prediction accuracy through structural awareness while maintaining computational efficiency. • Reframe graph edit distance as edge-level regression on a single instance graph. • Use a 3-WL edge-centric GNN with a quadratic readout built on metric embeddings. • Train end-to-end without combinatorial solvers and enable fast, batched inference. • Achieve state-of-the-art accuracy on AIDS, LINUX, and IMDB with low latency. • Offer a simple, scalable pipeline grounded in quadratic assignment for GED.

Pattern RecognitionVol. 179
Normandie Université (FR), Université de Rouen Normandie (FR), Institut National des Sciences Appliquées Rouen Normandie (FR)
Agence Nationale de la Recherche
Openalex Percentile: Top 14%
Graph Theory and Algorithms
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