Coumarin‐Based Azo Derivatives With Trifluoromethyl Substituents: A Combined Experimental and Computational Approach Toward Novel Anticancer Agents

ABSTRACT Cancer's global prevalence demands novel therapeutic agents with improved efficacy and selectivity. In this study, six azo‐containing derivatives featuring trifluoromethyl (─CF 3 ) groups and a coumarin scaffold were comprehensively examined, five of which were newly synthesized. Their chemical structures were confirmed using FTIR, UV–Vis, and NMR ( 1 H and 13 C) spectroscopy. DFT calculations (B3LYP/6‐311++G(d,p)) supported the experimental data, showing strong agreement between theoretical and observed spectra. All compounds fulfilled Lipinski's rule of five, according to ADMEt studies; however, compounds 4b and 4c showed the lowest projected toxicity (LD 50 : 6480 mg/kg). High binding affinities toward cancer‐related VEGFR2 protein targets (PDB IDs: 3VO3, 6GQO, 3VHE, and 3WZD) were found via molecular docking. The compound that interacted with 3VHE the most was compound 5a (–11.2 kcal/mol). The 6GQO–4a complex was shown to be the most stable (–120.099 kJ/mol) by MM/PBSA analysis. This finding was confirmed by 100 ns molecular dynamics simulations that showed constant hydrogen bonding and stable RMSD values. These results point to compound 4a as a promising lead molecule for the development of anticancer drugs, which calls for additional in vitro and in vivo research.

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Publication Details

Journal
ChemistrySelect
Published
2026-04-01
DOI
https://doi.org/10.1002/slct.73117
Primary Topic
Synthesis and biological activity
Type
article
Field-Weighted Citation Impact
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article

Coumarin‐Based Azo Derivatives With Trifluoromethyl Substituents: A Combined Experimental and Computational Approach Toward Novel Anticancer Agents

Tolga A. Yeşil, Tahir Tilki, Ömer Dilek
ChemistrySelect
Synthesis and biological activity
article

Coumarin‐Based Azo Derivatives With Trifluoromethyl Substituents: A Combined Experimental and Computational Approach Toward Novel Anticancer Agents

Tolga A. Yeşil, Tahir Tilki, Ömer Dilek
article en

Abstract

ABSTRACT Cancer's global prevalence demands novel therapeutic agents with improved efficacy and selectivity. In this study, six azo‐containing derivatives featuring trifluoromethyl (─CF 3 ) groups and a coumarin scaffold were comprehensively examined, five of which were newly synthesized. Their chemical structures were confirmed using FTIR, UV–Vis, and NMR ( 1 H and 13 C) spectroscopy. DFT calculations (B3LYP/6‐311++G(d,p)) supported the experimental data, showing strong agreement between theoretical and observed spectra. All compounds fulfilled Lipinski's rule of five, according to ADMEt studies; however, compounds 4b and 4c showed the lowest projected toxicity (LD 50 : 6480 mg/kg). High binding affinities toward cancer‐related VEGFR2 protein targets (PDB IDs: 3VO3, 6GQO, 3VHE, and 3WZD) were found via molecular docking. The compound that interacted with 3VHE the most was compound 5a (–11.2 kcal/mol). The 6GQO–4a complex was shown to be the most stable (–120.099 kJ/mol) by MM/PBSA analysis. This finding was confirmed by 100 ns molecular dynamics simulations that showed constant hydrogen bonding and stable RMSD values. These results point to compound 4a as a promising lead molecule for the development of anticancer drugs, which calls for additional in vitro and in vivo research.

ChemistrySelectVol. 11(14)
Süleyman Demirel Üniversitesi (TR), Isparta University of Applied Sciences (TR), Sinop University (TR)
Openalex Percentile: Top 23%
Synthesis and biological activity
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